afids

anatomical fiducials project
#openscience #neuroanatomy #neuroimaging #stereotaxy

[INCF @INCForg]

Announcing the 10K USD INCF Open Neuroscience Award!

The award:
- encourages participants to test resources dev'd by large-scale brain initiatives
- provides feedback to repositories re: usability & FAIRness
- promotes data reuse & collaborative science

https://t.co/jwroT5yBvN

[NIH Office of Data Science Strategy @NIHDataScience]

🚨 Please join us on July 12 for the next Data Sharing and Reuse Seminar where Satra Ghosh, Ph.D. will be presenting "The Transformative Potential and Challenges of Open Data and Technologies in Neuroscience."

Register here! https://t.co/NYkf7I0Msv

[Jonathan C. Lau @jclauneuro]

So proud of @alaa_t_ for representing the lab and @afids_project team at #OHBM2024 in South Korea🇰🇷! 🧠🎯

Photo credit: @jasonkai & VioletLiu.

[Alejandro @elneurozorro]

The Neurosynth Team is at #ohbm2024 in Seoul!

Come learn about our automated meta-analysis tools (including a preview of AI for Neurosynth 🤖) at the poster session.

Posters #2235 and #2251 on Wed/Th

[OHBM Open Science Special Interest Group (OS-SIG) @OhbmOpen]

OHBM #Hackathon was a blast! Thanks to all our attendees and volunteers for a hugely successful programme of events. Looking forward to 2025 in Brisbane already! #ohbm2024

[Alaa Taha @alaa_t_]

Excited to be giving a talk on @afids_project as part of #OHBM2024's #Neuroinformatics session (6/25 @ 12PM🇰🇷; GB 103)

Come 👀 how we're:
➡️pooling 20K+ community curated 🧠 landmarks to 📏 registration accuracy 🎯 and for #QC
➡️creating resources/apps to simplify this process

[Andreas Horn @andreashorn_]

Hivemind: Does anybody have code to warp lots of coordinates across spaces using ANTs? (without writing/reading text files)?

RT for reach – 🙏🙏

[Jonathan C. Lau @jclauneuro]

🔊Announcement🔊! The @neuroak & @jclauneuro labs are 𝙝𝙞𝙧𝙞𝙣𝙜 𝙩𝙬𝙤✌️𝙧𝙚𝙨𝙚𝙖𝙧𝙘𝙝 𝙨𝙤𝙛𝙩𝙬𝙖𝙧𝙚 𝙙𝙚𝙫𝙚𝙡𝙤𝙥𝙚𝙧𝙨 in basic + translational neuroimaging @WesternU.🧠🔭

Supported by @TRIDENTPCT @Brains_CAN.
https://t.co/dPheXyh4RS [Job ID: 35643 + 35752]
#ldnont 🇨🇦

[Jonathan C. Lau @jclauneuro]

Potential dev will include #hippunfold, #snakemake, @BIDSstandard, & @afids_project among other projects with integration into preclinical and clinical applications. 🧠🎯

Check out:
https://t.co/mLxTNnGiQn
https://t.co/ESwEIhzEbS

[Alejandro @elneurozorro]

NeuroVault is celebrating over a decade of researchers openly sharing brain maps! 🧠

We're looking back at the amazing growth & what's next. But first...

🚨We need your help! 🚨 Take our survey to shape the future of NeuroVault & data sharing!

https://t.co/PZU9lcwFDE

[ApertureNeuro @ApertureOHBM]

Do you use fslmaths for image processing? In our latest publication, Rorden et al. introduce niimath, a clone that offers performance optimization, improved portability, and open licensing https://t.co/A8paK31nbI @OHBM @fMRI_today @mallarchkrvrty1

[Mallar Chakravarty @mallarchkrvrty1]

so delighted to see this published in @ApertureNeuro!

Send papers about your tools!
Send papers about your open datasets!
Send papers about your science!

Support the journal developed by @OHBM for the whole community (all with a low low APC!!!).

[Jonathan C. Lau @jclauneuro]

Ever wondered about the current state of registration accuracy for #DBS electrodes in "MNI" space?🧠🎯

Some have used voxel overlap, but to our knowledge, there have not been any millimetric estimates.📏

Check out @MohamadAbbass19's deep dive.🤿
Comments/suggestions welcome!🙏

[Lead-DBS @leaddbs]

Fantastic work of great importance!! 👏👏

[Mohamad Abbass @MohamadAbbass19]

Finally, it is important to emphasize transparent & open software development, specifically @leaddbs, #fMRIprep, @BIDSstandard, w/ @afids_project & data (https://t.co/JOTiY02efl) making this analysis possible. #openscience #stereotaxy

Data/scripts: https://t.co/IZ4XWPG9SR [9/9]

[Chris Klink @ChrizKlink]

The final version of the paper is now openly available
@NeuroCellPress
via https://t.co/4CQOiH74Dr

[Mohamad Abbass @MohamadAbbass19]

Check out our latest #preprint investigating the millimetric impact of localization & registration accuracy on DBS electrode position in stereotactic space.🎯

https://t.co/t0swscQcJz

Powered by: @afids_project @leaddbs #fMRIprep @3DSlicerApp @BIDSstandard [1/9]

[jordandekraker @jordandekraker]

Check out HippoMaps at https://t.co/JIkKRcuTHC
with @BorisBernhardt @acehigh1952 @donna_gift @J_Royer_ @neuroak @BradKarat @sofievalk @JustineYHansen @misicbata @MarkusAxer @TheNeuro_MNI et al

[Brian Edlow @ComaRecoveryLab]

We mapped the connectivity of brainstem pathways that sustain human consciousness. A decade in the making...

Preprint: https://t.co/NXoIOiTaSV
Ex vivo MRI: https://t.co/e7nTwe07r4
Histology: https://t.co/alS3AkDTF5
Atlas: https://t.co/c4FWUM5PIA
Code: https://t.co/GqwNx6n2Ru

[OHBM Open Science Special Interest Group (OS-SIG) @OhbmOpen]

Full room today at the #OHBM #BrainHack! 🎉🥳