COVID-19 Pathways

Building a comprehensive, standardized knowledge repository of SARS-CoV-2 virus-host interaction mechanisms, guided by domain experts, based on published work.

[COVID-19 Pathways @CovidPathways]

The COVID-19 Disease Map (https://t.co/dvKq4NfBSv), is an effort to build a comprehensive, standardized knowledge repository of SARS-CoV-2 virus-host interaction mechanisms, guided by input from domain experts and based on published work. #covidpathways.

[BiGCaT Maastricht @bigcat_UM]

new: "Tissue-specific pathway activities: A retrospective analysis in COVID-19 patients" https://t.co/r4ybwZCZ2C #COVID19 #SARSCov2

[Martina Kutmon @mkutmon]

Nhung Pham is presenting our work on tissue-specific pathway activity in COVID-19 patients today at the 6th Disease Map Community Meeting
@WikiPathways @CovidPathways #DMCM2021
https://t.co/7vvr0n1TxN

[COVID-19 Pathways @CovidPathways]

new: "COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms" https://t.co/nVpyVPhgJE

[Penny Nymark, PhD @pennynymark]

Our paper describing the benefits of applying the #AdverseOutcomePathway framework to #COVID19 is now finally peer-reviewed and accepted for publication in #FrontiersinPublicHealth!
https://t.co/M2fhqoX6N7

[COVID-19 Pathways @CovidPathways]

including the #COVID19 track discussed in our weekly telcons: https://t.co/sDch4dlU2z

[Protein Data Bank @PDBeurope]

There are 270 new #PDB entries this week, including these 22 variant structures of the spike protein from #SARSCoV2, including B.1.1.7 (UK), B.1.351 (SA) & B.1.1.28 (Brazil) variants, solved by @sophie_gobeil, @priyam2021 et al. View all new entries at https://t.co/54E03LwhWU

[MINT database @MINT_database]

A Resource for the Network Representation of Cell Perturbations Caused by SARS-CoV-2 Infection: https://t.co/Ur5eLbj40n via @Genes_MDPI
@signor_database
@CovidPathways @elixir_it @BiologiaUniRM2 #ELIXIRvsCOVID19 #mdpigenes
https://t.co/JZpGNRGXCb

[COVID-19 Pathways @CovidPathways]

our project benefits from and contributes to the work of the EBI open data platforms.

If you have not done so already, consider filling out their survey

[EMBL-EBI @emblebi]

Dear #lifescience community, we need your 🧠

If you use #opendata, please fill in our impact survey to help us understand the value of open data resources, and to keep the data flowing.

https://t.co/jbZSadoZvY

#valueopendata #openscience #FAIRdata #openaccess

[COVID-19 Pathways @CovidPathways]

maybe members from our community can coin in too? Are the PANGO lineage codes useful in our project? Please leave your comment on the Wikidata page linked below.

[Wikidata Wikiproject COVID-19 @WikidataCOVID19]

New COVID-19 - related proposal on @wikidata:

@arambaut 's PANGO lineage code (https://t.co/cqQ1AOHjEo)

https://t.co/rAPxWYuVLL

Which other properties related to SARS-CoV-2 strains you would like to see on Wikidata next?

[BiGCaT Maastricht @bigcat_UM]

we had a @WikiPathways @CovidPathways curathon event and with quite a few pathway updates (see screenshot) and three new @wikidata items too :) Updated curation reports: https://t.co/eT7PXGxZOx

[Andra Waagmeester @[email protected] @andrawaag]

HT/@nightrose I just stumbled upon the Wikidata Entity Explosion extension for Chrome and Firefox. This is really awesome! Once installed the extension will list metadata from #wikidata for a given site. Tested on #inaturalist and #wikipathways. awesome! https://t.co/IcKzG2nXND

[COVID-19 Pathways @CovidPathways]

revised preprint "COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms" now online: https://t.co/JThVP0Nwbb

[COVID-19 Pathways @CovidPathways]

revised preprint "COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms" now online: https://t.co/JThVP0Nwbb

[Chris Evelo @Chris_Evelo]

Webinar on "Vitamin D, Immunity and Covid-19" by @MartinHewison, February 24 organised by NuGO, @CovidPathways and @ELIXIREurope's Food and Nutrition Community: https://t.co/wTWlDVlIze

[COVID-19 Pathways @CovidPathways]

new video: "COVID-19 Disease Map, computational knowledge repository of SARS-2 virus-host interaction mechanisms" https://t.co/6pS0AgGrYl

[Andra Waagmeester @[email protected] @andrawaag]

I am proud to share our latest paper on "A protocol for adding knowledge to #Wikidata: aligning resources on human coronaviruses" is online. https://t.co/FkE4HzI1WM

[Chris Evelo @Chris_Evelo]

Interleukin-6 Receptor Antagonists tocilizumab and sarilumab, normally used arthritis, in Critically Ill Patients with Covid-19 - Preliminary report https://t.co/fPCezOiZi6 Finds better outcome including survival

[Nature Portfolio @NaturePortfolio]

Young children account for only a small percentage of COVID-19 infections, a trend that has puzzled scientists. A growing body of evidence suggests why: kids’ immune systems seem better equipped to eliminate SARS-CoV-2 than are adults’. https://t.co/59zo1KM6J2

[Chris Evelo @Chris_Evelo]

In todays @MaastrichtU data science seminar (in 40 minutes) I will introduce the @CovidPathways COVID-19 Disease Maps project and @bigcat_UM postdoc Nhung Pham will talk about the @WikiPathways specific efforts in our @NWO_Science project https://t.co/bbIMCJCOS7