João Pires

EUPHEM Fellow, ECDC Fellowship, Norwegian Institute of Public Health | Public Health Microbiology | AMR |

[Jose F Delgado-Blas @JFDelgado_Blas]

Extremely happy to have participated in the first ever Klebsiella Epidemiology and Biology Symposium #KLEBS2024 organized at home @institutpasteur by @sylvainbrisse and @chcrestani. Can't wait for the next one to discuss more about this fascinating bacteria with so many friends!

[Emma Griffiths @griffiemma]

Integrating different types of data across sectors can be challenging. The Canadian One Health AMR genomics contextual data standard, built in partnership with the Can gov't, is readily adapted for international use and supports public data sharing. #GRDI https://t.co/VW544CZi3U

[Public Health Alliance for Genomic Epidemiology @pha4ge]

Webinar Announcement 📌

27 March 2024 📅
16:00 - 17:00 UTC ⏰

Best Practices for Public Health #Bioinformatics Pipelines🧬💻

Speaker: @kevinlibuit - @theiagen🎙️

Registration: https://t.co/cuTBH0qA4V

#PHA4GE #PublicHealth #Genomics

[João Pires @Jppires_]

@Kelpiesi So relatable! My [swiss] german has been on a free fall since I moved to Norway 😅

[Jose F Delgado-Blas @JFDelgado_Blas]

Happy to share the work ‘Global scenario of the RmtE pan-aminoglycoside-resistance mechanism: emergence of the rmtE4 gene in South America associated with a hospital-related IncL plasmid’
https://t.co/y40Fpvkl2R
Thanks to @AruUcm, @TheCGPS and @iibcaudo for making it possible!

[Epiet Alumni Network @EANBoard]

On 13-14 March, the @SSI_dk fellows in 🇩🇰 welcomed #EPIET #EUPHEM fellows & facilitators from 🇸🇪, 🇳🇴 & 🇫🇮 for the annual Nordic Mini Project Review Module. Fruitful discussions set the base for strengthening collaborations between the Nordic Public Health Institutes.

[Dr. Dr. Helene Andrews-Polymenis, @HPolymenis]

Can we talk about bullying in academia. Man, I’m just tired.

[João Pires @Jppires_]

Finally!

[Emma Griffiths @griffiemma]

SAVE-THE-DATE!
The next Global Microbial Identifier meeting (GMI13) on microbial data sharing will be held in downtown Vancouver, Canada on September 13-15 2023 (both in-person and online). Program and registration details will be available soon at https://t.co/YCU8P8myZ3.

[Emma Griffiths @griffiemma]

SAVE-THE-DATE!
The next Global Microbial Identifier meeting (GMI13) on microbial data sharing will be held in downtown Vancouver, Canada on September 13-15 2023 (both in-person and online). Program and registration details will be available soon at https://t.co/YCU8P8myZ3.

[Bruno Gonzalez Zorn @_bgzorn_]

New Paper Out! Superbacteria in Hospital wastewater in Africa. Dissemination Routes of Carbapenem and Pan-Aminoglycoside Resistance Mechanisms in Hospital and Urban Wastewater Canalizations of Ghana | mSystems https://t.co/bhdB7sP9ma
@ESCMID @SEMicrobiologia @JFDelgado_Blas

[Adam Grant @AdamMGrant]

In cultures of arrogance, people get rewarded for expressing certainty and conviction. The most confident speaker claims the most status.

In cultures of humility, people are applauded for admitting ignorance and asking questions. The most complex thinker earns the most respect.

[ALLEA @ALLEA_academies]

.@Sci_for_Ukraine is centralising information on support provided by the global research community to #Ukraine researchers & students 🇺🇦

Check their website to find and submit available support 👇

🔗https://t.co/98nJpCCRuD

#ScienceForUkraine #StandWithUkraine #AcademicTwitter

[João Pires @Jppires_]

Support for #Ukrainian 🇺🇦scientists is available at @ETH_en and many other European institutions. RT!

https://t.co/6XTCn7QGqH

@Sci_for_Ukraine #ScienceForUkraine #AcademicTwitter

[Marcus Wenne @mnyt_aqw]

NEW @EMBARK_JPIAMR #AMR digest is OUT https://t.co/Ukt4VQH8Do

E. coli in food animals /@Jppires_

ColE1-like plasmids /@M_AresArroyo

Global Microbial Gene Catalog /@luispedrocoelho

cardiometabolic diseases /@inanna_nalytica

& more!

[João Pires @Jppires_]

Check our recent work on tracking AMR in E. coli using public genomes! You can also check how bias in public data affect our estimates. Thanks to the great support of @thvanboeckel, @sbonhoeffer and @Jana_Huisman

[Thomas Van Boeckel @thvanboeckel]

🔴[New Paper] “Increase in antimicrobial resistance in Escherichia coli in food animals between 1980 and 2018 assessed using genomes from public databases”
in @BSACandJAC

https://t.co/JANpZTVxsP

Work led by Dr @Jppires_ @ETH_en. Congrats !

[João Pires @Jppires_]

Check our recent work on Salmonella resistance dynamics using public genomes. Huge effort thanks to @thvanboeckel, @Jana_Huisman, and @sbonhoeffer! If you can't find your genome herein, make sure to submit the metadata next time!

[Thomas Van Boeckel @thvanboeckel]

🔴[New Paper] “Multidrug Resistance Dynamics in Salmonella in Food Animals in the United States: An Analysis of Genomes from Public Databases in @JournalSpectrum

https://t.co/UPcVbuOevx

Work led by Dr @Jppires_ . Congrats !!!

[João Pires @Jppires_]

@_natachacouto_ @ESCMID You can log in with your ESCMID password instead, the code will show up automatically

[João Pires @Jppires_]

New Black Mirror episode out now (Science Edition). This is very disturbing...

[Chris Harmer @CHarmer_MGE]

In the last two weeks I have been through the most harrowing peer-review process in my life. A story and a lesson for all....

I reviewed a paper for a large Q1 Microbiology journal. Huge problems with paper. Detailed confidential review submitted to authors.

1/

[João Pires @Jppires_]

@burcutepekule @AcademicsSay Praise be

[João Pires @Jppires_]

A must read at the end of Pride month🏳️‍🌈:
"LGBTQ+ identity is just one way of classifying social oppression, and it may intersect with other forms such as sexism, racism, ableism and classism."

I wonder what initiatives exist across your research institutions to address this.