Michael Stadler

computational biology; genomics; @Bioconductor; @FMIscience; „Heimwehwalliser“

[FMI science @FMIscience]

💫 We're hiring! The Computational Biology Facility is looking for a Computational Proteomics Scientist to collaborate on cutting-edge proteomics projects, develop new analytical approaches, and publish impactful research.
Apply by April 12 at: https://t.co/gXmNxEbYFh

[FMI science @FMIscience]

The Proteomics Platform at the FMI is seeking a skilled Proteomics Specialist who is passionate about cutting-edge technologies in multi-disciplinary projects.
Apply by November 30, 2024 at https://t.co/OvBnCN4V31

[Friedemann Zenke @hisspikeness]

This event was great fun and a fantastic opportunity for the lab to showcase our new palm-sized LIF neurons, which our collaborators @sbillaudelle, @NeuroTMA et al. from Heidelberg University built for education. The students (and teachers) loved it!
https://t.co/G5oEc4EElt

[StarkLab @stark_lab]

We are very excited to present a major breakthrough achievement – the de novo design of synthetic enhancers for selected tissues in fruit fly embryos in vivo using deep- and transfer learning, @deAlmeida_BPet al published today in @Nature https://t.co/TIlPrBKYaK. Thread 👇(1/N)

[Bioconductor @Bioconductor]

**We are moving platforms**

Bioconductor will cease posting on Twitter/X as of December 17, 2023.

Instead we will be continuing to post on other social media platforms that better reflect our community’s code of conduct.

Read more in our blog post: https://t.co/X5UFDaHw7I

[FMI science @FMIscience]

The winners of the Ruth Chiquet Prize are Charlotte Soneson from our Computational Biology platform and @seebj from our Proteomics platform for jointly developing an R package for the statistical analysis of proteomics data: https://t.co/7iOYdyJPg9 Congratulations!
#FMIAM2023

[Dario Righelli @drighelli]

As usual, I forgot to fill the @Bioconductor form for the official #speaker spotlight, so here I am telling you that today (21) at 13:30 I’ll give a short #workshop (45 mins) about Differential Accessible Regions detection in 10xGenomics #multiome #ATAC data.

#EuroBioc2023

[bioRxiv Bioinfo @biorxiv_bioinfo]

einprot: flexible, easy-to-use, reproducible workflows for statistical analysis of quantitative proteomics data https://t.co/bd55poO27v #biorxiv_bioinfo

[FMI science @FMIscience]

Congratulations to @LucaGiorgetti! The FMI senior group leader is among 69 newly elected @EMBO Members this year. Eight other group leaders currently at the FMI are EMBO members.
https://t.co/boG7jutwmv

[Bioconductor @Bioconductor]

📢 Registration is now LIVE for #EuroBioC2023 in Ghent. Don't miss out, secure your spot today! 👉https://t.co/yTCcG2eAeL
#Bioinformatics #Rstats

[Michael Stadler @mbstadler]

Do you analyse Multiplexed Assays of Variant Effect (MAVE) data? Maybe our recent R package `mutscan` could be of interest to you (https://t.co/VJkzK4Olxn, paper: https://t.co/LPXaVUnccT). Thanks to @CSoneson, @AlexBendel_ and @Guillaune_Diss for the wonderful collaboration!

[Bioconductor @Bioconductor]

🎓 Upcoming #biocsmorgasbord! Learn "RNA-seq analysis with Bioconductor" 🧬💻 with Charlotte Soneson @CSoneson and Jenny Drnevich

📅 May 22-26
➡️ https://t.co/vDTpJF5KT7
#Bioinformatics #rstats

[FMI science @FMIscience]

📢We're hiring! The FMI is seeking to recruit a Head of #IT to lead an interdisciplinary team of IT specialists and shape the institute's IT strategy.

For more info and to apply: https://t.co/s5L3kmD0Sg

Deadline: 31st May 2023

#ITJobs

[Bioconductor @Bioconductor]

📣 Bioinformatics enthusiasts! You've got an extra week to submit your #EuroBioc2023 abstract! 🚀 Deadline extended to April 24th, 5pm CEST.

Don't miss the chance to showcase your work and connect with the community! 🤝

#Bioinformatics #Genomics #RStats

[Mark R@markrobinsonca@{genomic.social,bsky.social} @markrobinsonca]

Still a few days left to submit your abstract to #EuroBioC2023 ..

[Nature Methods @naturemethods]

Out today! An analysis from @const_ae and @wolfgangkhuber compares different transformation approaches for the analysis of single-cell RNA-seq data and provides recommendations for method selection.

https://t.co/TDuAoEj43U

[𝕐 @nomad421]

This is pretty slick — query with an accession and directly download actual read files (with preference for SRA or ENA) directly in @rpetit3's fastq-dl https://t.co/Pn2L32hFMQ; all wrapped up in a nice "rich" interface :).

[FMI science @FMIscience]

🗣️Please RT: Applications for our #PhD and #MD-PhD programs are now open! Based in Basel, Europe's top #lifescience hub, we offer interdisciplinary training in neurobiology, multicellular systems and genome regulation.
📅Apply by May 1 at https://t.co/l20erA9RBO
#AcademicTwitter

[Bioconductor @Bioconductor]

🚨📢 On March 8th, the Bioconductor Core Team will rename the default branch on `https://t.co/IJYgJFdtuq` from `master` to `devel`.

For more details, see the

1. Blog post https://t.co/TKnHtVzxdX

2. Branch Rename FAQ
https://t.co/ENN8mzr0kh

[Bioconductor @Bioconductor]

📣 Abstract submission is open for #EuroBioC2023 conference in Ghent 🇧🇪 Sep 20-22 https://t.co/dqFbAAN9IK !

Submit an abstract by April 14 for

Short talk
Software demo
Poster
Contributed session
BOF session

👉 Submit here https://t.co/N6uUBLTMjE

#rstats #Bioinformatics