Téo Lemane

Postdoc at @GenoLAGE / @GenoUMR_GM

[Téo Lemane @TeoLemane]

kmtricks is available on github: https://t.co/fxW11iwoRC

[Téo Lemane @TeoLemane]

kmtricks: Efficient construction of Bloom filters for large sequencing data collections.
https://t.co/TFoIvxvReY
With @RayanChikhi @pashadag @p_peterlongo

[Téo Lemane @TeoLemane]

For metagenomes, collection-aware k-mer filtering recovers an order of magnitude more k-mers that would have been otherwise discarded due to their low abundance. This allows to analyze weak signal present in complex metagenomes.