MLSB (in San Diego + Copenhagen)

Machine Learning in Structural Biology workshop co-located with NeurIPS 2025 & at EurIPS 2025. Dec 7.

[Gina El Nesr @ginaelnesr]

Don't worry if you missed MLSB! We recorded all of the talks!! 🕺💃

YouTube: https://t.co/sKUWL7Zd2Y

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

On YouTube now!
https://t.co/EjhaZ0g3Rx

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Missed MLSB this weekend? Don't worry, we recorded the sessions! Find recordings of talks from invited speakers and some of the contributed posters online!

Link below🔽

[Gina El Nesr @ginaelnesr]

Absolutely blown away by the turn out at @workshopmlsb today.

Thank you to the >600 people who came through the venue, and >150 that joined over Zoom throughout the day. Truly an exciting time to be innovating in ML for Structural Biology ♥️

[Gina El Nesr @ginaelnesr]

I am so grateful to our wonderful speakers, sponsors, and the rest of the organizing team who took a risk and made the first independent MLSB possible.

[Gina El Nesr @ginaelnesr]

MLSB this year was also a trans-continental feat.

A wildly successful MLSB @ EurIPS happened in Copenhagen at the same exact time. And we finally reached accepted submissions from universities in every habitable continent, including Africa 🫶

[Mile Sikic @msikic]

It was a great opportunity to talk at the MLSB. I hope I converted at least one person to study RNA instead of proteins :)

[Hannah Wayment-Steele @HWaymentSteele]

Had a great day at @workshopmlsb ! Thanks so much to the organizers for the invite and putting on a fantastic program!

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Panel time! With our speakers John Moult, Pratyush Tiwary, Krysztof Fidelis, @HWaymentSteele, @ZhongingAlong, @msikic.

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

We have the distinct pleasure of hosting the CASP organizers at MLSB this year. Up next is John Moult from CASP! Thank you for joining us.

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next invited speaker is @msikic on "Al-driven RNA structure prediction".

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next talk is "RNA thermodynamics can be replaced with learnable representations" by Murphy Angelo

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next contributed talk is "Taxoformer: Hierarchical Transformer for Predicting the Full Taxonomic Lineage of Protein Sequences" by @mparsa_

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next contributed talk is "Separating signal from noise: a self-distillation approach for amortized heterogeneous cryo-EM reconstruction" by Minkyu Jeon and Jeffrey Gu.

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next contributed talk is "Can Biomolecular Structure Predictors Generalize to Alternative Conformations?" by @karsonchrispens

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next talk is by @ZhongingAlong on "ML for protein structure determination", starting now!

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

The MLSB poster session is 🔥�� A big thanks to all the folks that are joining us today, both as presenters and attendees.

As a reminder - we are off campus from the NeurIPS main conference at UCSD Park and Market.

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

😂

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next invited speakers is @HWaymentSteele on data for protein dynamics.

[MLSB (in San Diego + Copenhagen) @workshopmlsb]

Our next invited talk is by Pratyush Tiwary on "Boltzmann weighted ensembles for proteins and RNA with af2rave and RNAnneal"