DNA & RNA research

Highlighting publications about #DNA #RNA #genomics #RNAseq #evolution #genome #plants #bioinformatics #biotech #synbio #openscience #preprints

[DNA & RNA research @AndGenomics]

Phylogenomic approach uncovers the hybrid origin and biogeographic diversification of the plum genus
https://t.co/I9BgH0MgkC

Large-scale Phylogenomics Reveals Systematic Loss of Anthocyanin Biosynthesis Genes at the Family Level in Cucurbitaceae
https://t.co/otsLx0IlpO

[DNA & RNA research @AndGenomics]

A New Cost Effective, Simplified Workflow for Transposon Insertion Sequencing (TIS)
https://t.co/9205XGYK85

Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis
https://t.co/iadXltaeeo
#Genomics #Bioinformatics

[DNA & RNA research @AndGenomics]

MAVISp: A Modular Structure-Based Framework for Protein Variant Effects
https://t.co/CkwfwN7SkW

NAVIP: Unraveling the Influence of Neighboring Small Sequence Variants on Functional Impact Prediction
https://t.co/srRtE4xi7z

[DNA & RNA research @AndGenomics]

Distribution of Gene Tree Topologies with Duplication, Loss, and Coalescence
https://t.co/kDzJ42Ne2H

DupyliCate - mining, classifying, and characterizing gene duplications
https://t.co/3EfgZ1HzWX

[DNA & RNA research @AndGenomics]

LoFi: 4 haplotype-resolved Cannabis genomes enable characterization of large structural variants
https://t.co/AEiGcwF7ur

Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis
https://t.co/iadXltaeeo

[DNA & RNA research @AndGenomics]

orthogene: a Bioconductor package to easily map genes within and across hundreds of species
https://t.co/dpvhPuUDs6

DupyliCate - mining, classifying, and characterizing gene duplications
https://t.co/3EfgZ1I7Mv

#Evolution #Bioinformatics

[DNA & RNA research @AndGenomics]

NEMO: Improved and accurate models for identification of 6mA using Nanopore sequencing
https://t.co/5B0RyrPk5Z

Large scale genomic rearrangements in selected A. thaliana T-DNA lines are caused by T-DNA insertion mutagenesis
https://t.co/iadXltaM3W

#Genomics #Bioinformatics

[DNA & RNA research @AndGenomics]

This never gets old although it is actually about the language used in publications 😂

[Scholarship for PhD @ScholarshipfPhd]

The irony

[DNA & RNA research @AndGenomics]

Ubiquitous functional synergy partially explains why most transcription factor binding is non-functional
https://t.co/XM0w8hvY93

Automatic identification and annotation of MYB gene family members in plants
https://t.co/Me2LCqieax

#Genomics #Bioinformatics

[DNA & RNA research @AndGenomics]

Comprehensive benchmarking of tools for nanopore-based detection of DNA methylation
https://t.co/dkxcrUsDrM

Cookbook for Plant Genome Sequences
https://t.co/cutKT5faiq

#Genomics #Bioinformatics #PlantSciences

[DNA & RNA research @AndGenomics]

Pervasive translation of short open reading frames and de novo gene emergence in Arabidopsis
https://t.co/uIkPLUTpyn

DupyliCate - mining, classifying, and characterizing gene duplications
https://t.co/3EfgZ1HzWX

#Genomics #Bioinformatics #Evolution

[DNA & RNA research @AndGenomics]

Evolutionary dynamics of the proanthocyanidin biosynthesis gene LAR

https://t.co/K8OXJ7teEV

#Evolution #FlavonoidBiosynthesis #PlantSciences #Bioinformatics #Genomics #SciComm #OpenScience

[DNA & RNA research @AndGenomics]

ProteoCast: a web server to predict, validate, and interpret missense variant effects
https://t.co/r1HEqVd5q2

NAVIP: Unraveling the Influence of Neighboring Small Sequence Variants on Functional Impact Prediction
https://t.co/srRtE4xi7z

#Protein #Diversity #Variation

[DNA & RNA research @AndGenomics]

Explaining how mutations affect AlphaFold predictions
https://t.co/SMnRAmAruN

NAVIP: Unraveling the Influence of Neighboring Small Sequence Variants on Functional Impact Prediction
https://t.co/srRtE4xPX7

#Bioinformatics #Genomics

[DNA & RNA research @AndGenomics]

AdaGenes: A streaming processor for high-throughput annotation and filtering of sequence variant data
https://t.co/jNHQPAfUZT

NAVIP: Unraveling the Influence of Neighboring Small Sequence Variants on Functional Impact Prediction
https://t.co/srRtE4xi7z

[Michael 英泉 Eisen @mbeisen]

In light of the launch of Cell Press Blue https://t.co/b1PLJWA47S, I want to let everyone know about @biorxivpreprint Blue

[DNA & RNA research @AndGenomics]

Evolutionary dynamics of the proanthocyanidin biosynthesis gene LAR
https://t.co/K8OXJ7teEV

[DNA & RNA research @AndGenomics]

The grain amaranth pangenome reveals domestication-associated changes in diversity and function of structural variation
https://t.co/knXjHm8peO

Pangenome of cultivated beet and crop wild relatives reveals parental relationships of a tetraploid wild beet
https://t.co/HV57qEOD4Q

[DNA & RNA research @AndGenomics]

LORA: a polymorphic multi-sample LOng Read Assembly pipeline
https://t.co/cpYXuBIuXr

Cookbook for Plant Genome Sequences
https://t.co/cutKT5fI7Y