AnniZ Lab

Founder, CEO @ Genomiverse | BioinfoPhD | Asst Prof @ NTU | Biology-informed AIs for microbes | Ligand-protein binding | knowledge graph GNN

[AnniZ Lab @AnniZLab]

Anni's new startup! https://t.co/qOWK7dkvQF
1) Biology-informed AI for bacterial DNA-protein binding prediction (demo - new bindings in E. coli; 40 species in July; 6k+ species this year);
2) Microbiome knowledge graph based on 143k papers: (demo - 1% data; 100% data in July)!

[Feng Zhang @zhangf]

Awesome!

[AnniZ Lab @AnniZLab]

Check out our updated website - we would love new ideas! We used an LLM to restyle it and then spent a bunch of manual effort going through the results. We are now building checks to keep things organized - please talk to us if you are interested :) 🦠🖥️✨ https://t.co/qOWK7dkvQF

[AnniZ Lab @AnniZLab]

New feature: querying multiple terms in our microbiome knowledge graph (143k papers)! Generated by LLM prompt engineering with > 96% accuracy (expect-check). Demo with 1% data: https://t.co/7ror7Iowhn Feedback is super appreciated :)
#microsky #microbiomesky 🦠🧪🧬🖥️✨

[AnniZ Lab @AnniZLab]

Lots of fun to present our latest work on 11th Microbiome R&D and Business Collaboration Congress: Asia! https://t.co/qrqoFmE1fg

[AnniZ Lab @AnniZLab]

Anni's new startup! https://t.co/qOWK7dkvQF
1) Biology-informed AI for bacterial DNA-protein binding prediction (demo - new bindings in E. coli; 40 species in July; 6k+ species this year);
2) Microbiome knowledge graph based on 143k papers: (demo - 1% data; 100% data in July)!

[AnniZ Lab @AnniZLab]

AnniZLab is now on Bluesky YAY https://t.co/QdiSbE9oul
We’ll share new job posts, exciting project updates, and fun lab activities there. Please follow us if you are interested :)

[AnniZ Lab @AnniZLab]

AnniZ Lab at Nanyang Technological University is recruiting one PhD student with an interest in AI 👩‍💻& Microbiology 🦠(details at https://t.co/2TIF7Nolzr). If you are interested, please reach out with your CV to [email protected]. Thank you!

[AnniZ Lab @AnniZLab]

NTU College of Science shares our new DNA alignment tool published in Genome Biology! https://t.co/aC4wR2Mx1y

[NTU College of Science @ScienceNTU]

A team of scientists from @SCELSE_SG and @ntusbs, led by Asst Prof Anni Zhang (@AnniZLab), has developed a new DNA sequence alignment algorithm, called X-Mapper, that is significantly faster and more accurate than existing methods. https://t.co/Kywqi0SI3y

[NTU College of Science @ScienceNTU]

A team of scientists from @SCELSE_SG and @ntusbs, led by Asst Prof Anni Zhang (@AnniZLab), has developed a new DNA sequence alignment algorithm, called X-Mapper, that is significantly faster and more accurate than existing methods. https://t.co/Kywqi0SI3y

[AnniZ Lab @AnniZLab]

We definitely don't want to confuse our audience💪! https://t.co/yXakhYjHBJ

[AnniZ Lab @AnniZLab]

For anyone using BMC proofing system, be careful not to let it delete a word🤣! https://t.co/aC4wR2Mx1y #notfoolproof #publishingIShard

[AnniZ Lab @AnniZLab]

For anyone using BMC proofing system, be careful not to let it delete a word🤣! https://t.co/aC4wR2Mx1y #notfoolproof #publishingIShard

[Jeff Gaston @mathjeff1]

Our new short read sequence aligner was just published!

https://t.co/xb0maoPxRT

We spent a bunch of effort making it accurate and easy to use. Check it out!

@AnniZLab

[AnniZ Lab @AnniZLab]

Our new tool "X-Mapper: fast and accurate sequence alignment via gapped x-mers" now published on Genome Biology! Please try it if you work on DNA sequences :) https://t.co/NloYIt2i8h https://t.co/aC4wR2Mx1y

[AnniZ Lab @AnniZLab]

@mathjeff1 Please try it if you work on DNA sequences :) https://t.co/NloYIt2i8h

[AnniZ Lab @AnniZLab]

@razoralign Please try it if you work on DNA sequences :) https://t.co/NloYIt2i8h

[antisense. @razoralign]

X-Mapper: fast and accurate sequence alignment via gapped x-mers https://t.co/ExJoKuoUhl

[AnniZ Lab @AnniZLab]

@CellGenomics This study was also reported by MIT News! https://t.co/SIfKm0XhBA

[Cell Genomics @CellGenomics]

CRISPR-Cas spacer acquisition is a rare event in human gut microbiome https://t.co/xta7pMzQyF

[AnniZ Lab @AnniZLab]

MIT News: https://t.co/SIfKm0XhBA — Sharing our new publication in Cell Genomics: https://t.co/Q5wuMnjCXR about why our human gut microbiome rarely updates its CRISPR defense systems! @CellGenomics @MIT @CellPressNews

[SCELSE @SCELSE_SG]

Meet Asst Prof Anni Zhang: MIT-trained Computational Biologist & SCELSE Collaborator! Learn about her research passions, future vision, and hand drum skills. Watch video till the end for a surprise: https://t.co/9NLmkUGEtZ