Karina B

[EMBL Events @EMBLEvents]

Did you miss #EMBLSpatialBiology? Check out our latest blog by event reporter Karina Barreiro to explore the research presented at the conference from the perspective of a scientist just starting in the field. 👀🔬

🔗 https://t.co/d0OtkIoCwt

@BarreiroK

[Karina B @BarreiroK]

Outstanding talk by Sean Bendall from Stanford University, USA “Massively multiplexed imaging of human neuropathology” closing #EMBLSpatialBiology conference.
@EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Sandra de Haan from Leiden University Medical Center, The Netherlands showed how spatial transcriptomics was used to study inclusion body myositis and shed light on the link between inflammation and degeneration.
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Great talk by Koen Rademaker from Wellcome Sanger Institute, United Kingdom showing the use of spatial transcriptomics to study autism susceptibility genes.
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Session 6 - Spatial pathology: New insights for disease - continues with Anna Pascual Reguant from Centro Nacional de Análisis Genómico (CNAG), Spain presenting “Tracing colorectal malignancy transformation from cell to tissue scale”!
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Inspiring talk by Miranda Orr from Washington University in St Louis, USA showing ultra-high plex detection of RNA and proteins with subcellular resolution for the study of Alzheimer’s disease
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Now at #EMBLSpatialBiology Nikolaus Rajewsky from Max Delbrück Center, Germany is presenting a wonderful Keynote lecture “Spatial omics predicts disease trajectories”
@EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Comprehensive talk by Britta Velten from Heidelberg University, Germany on computational tools to analyze spatial omics data across resolutions and molecular layers!
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Lucas Pelkmans from University of Zurich, Switzerland showed Iterative Indirect Immunofluorescence Imaging (4i) for the study of subcellular and cellular states. Exciting applications and results!
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Great talk by Kotaro Tomuro from RIKEN / The University of Tokyo, Japan showing "APEX-Ribo-seq" for the study of translation at subcellular resolution
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

The session “Subcellular spatial biology” at #ESSB2025 started with Ralf Jungmann from Max Planck Institute of Biochemistry, Germany presenting “From DNA Nanotechnology to biomedical insight: Towards single-molecule spatial omics“
#EMBLSpatialBiology @EMBLEvents

[Karina B @BarreiroK]

Sergio Marco Salas from Helmholtz Center Munich, Germany showed a framework to study the biological relevance of RNAs that are unassigned after cell segmentation. Intriguing!
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Great talk by Ziqi Kang from The University of Helsinki, Finland “SPACEstat: quantitative spatial point pattern and network analysis in the tumor microenvironment”
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Excellent overview by Julio Saez-Rodriguez from EMBL-EBI Hinxton, UK on resources and methods that combine multi-omic spatial data and single-cell data with biological knowledge for the study of e.g tissue biology and disease mechanisms
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Ekansh Chauhan from Cancer Research UK Scotland Institute, UK presented a computational framework to integrate tissue morphology and spatial transcriptomics data for the study of tumour microenvironments
#EMBLSpatialBiology @EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Exciting talk by Erick Armingol from Wellcome Sanger Institute, UK showing how scCellFie can be used to infer metabolic activities from single cell and spatial transcriptomics
#EMBLSpatialBiology @EMBLEvents

[Karina B @BarreiroK]

Now at #ESSB2025 Johanna Klughammer from Ludwig-Maximilians-Universität München, Germany opens the session 4 presenting "Multi-modal spatial and single-cell profiling of metastatic breast cancer and integrated computational analysis"
#EMBLSpatialBiology @EMBLEvents

[Karina B @BarreiroK]

More outstanding scientific presentations today at #EMBLSpatialBiology starting in few hours! The day starts with Session 4: “Data analysis for spatial biology”!
@EMBLEvents #ESSB2025

[Karina B @BarreiroK]

Today at #EMBLSpatialBiology Adrien Hallou from University of Oxford, UK presented a new exciting computational framework that enables the inference of mechanical forces at spatial resolution from a tissue slice analyzed using spatial transcriptomics!
@EMBLEvents

[Karina B @BarreiroK]

Now at the EMBL conference “Spatial biology: the melting pot”: Barbara Treutlein from ETH Zürich, Switzerland is presenting “Mapping cell type diversity in the brain -from axolotl to human organoids”! #EMBLSpatialBiology @EMBLEvents