cariaso

formerly

[cariaso @cariaso]

@jasonshevrin https://t.co/RlrY21Wj49

[cariaso @cariaso]

@townsomerset More about the property https://t.co/iVaXuxoIrd and https://t.co/60zauROs8N

[Kieran Samuk @ksamuk]

PSA, since I've now seen problems arising from this: As of Sept 2023, GATK no longer makes missing genotypes explicit in VCFs (i.e. "./." as in the VCF spec). Missing genotypes are instead coded as "0/0" with a DP=0 format field. See attached for examples.

[cariaso @cariaso]

@dcsnowball

[cariaso @cariaso]

@BeingDanNolan https://t.co/5O54zpFCFY

[cariaso @cariaso]

@BeingDanNolan I swear there is 1 more I can half remember, but not yet find

[cariaso @cariaso]

@BeingDanNolan https://t.co/FJp3082mnq

[cariaso @cariaso]

@BeingDanNolan https://t.co/FJp3082mnq
https://t.co/N9yOzMVOIq

[cariaso @cariaso]

@aqdasak @willmcgugan you cannot get simpler than command line. And on demand you can gradually support as much complexity as a textual terminal provides. A desktop or web app can do complex, but they cannot be as simple as a command line.

[cariaso @cariaso]

@willmcgugan an ANSI BBS game to be called TradeWars 2022

[cariaso @cariaso]

@kennethreitz42 "magentic" != "magnetic"

[cariaso @cariaso]

If you're attending #ASHG23 and interested in getting together and talking shop, reach me here, by email or perhaps over on @cariaso.bsky.social

[cariaso @cariaso]

@chrismanfrank @growthesque but do you though? I get the vibe you'd like to be a cult leader, and think he's a good example of it to learn from.

[cariaso @cariaso]

@chris_dag @b0rk also worth knowing wormhole / destiny allow 0, 1 or both machines to be working over tor, enabling anon send & receive.

[cariaso @cariaso]

@chris_dag @b0rk @chris_dag fyi least authority runs their own relays and distributes as https://t.co/Zz2qpE7W34

relay_url = "wss://mailbox.mw.leastauthority.com/v1"
transit_helper = "tcp://relay.mw.leastauthority.com:4001"

[Dan 🟩 @danbolser]

I hate no-reply emails!

"no-reply@ is never acceptable" by Dan Bolser #DEVCommunity https://t.co/aIN5h5VkqI

[cariaso @cariaso]

@yokofakun if the platform was non-illumina, particularly Oxford Nanopore, the errors are perhaps a function of neighboring sequence making it a tough region. Are the alt alleles always the same, and the same as the minor allele of the dragen het?

[cariaso @cariaso]

@perrymetzger add Adv36 and obesity to the list
https://t.co/2pCMnlYvge

[Out of Context Human Race @NoContextHumans]

https://t.co/jsFmL1LPo9