DeepLabCut 🦄

Python package for markerless pose estimation 4 animals (including humans) | free, open code

[DeepLabCut 🦄 @DeepLabCut]

🌎 Home Page: https://t.co/hmaU64HoaR
📚Docs: https://t.co/AMkaXQQSsM
🛠️ Install: pip install 'deeplabcut[gui,tf]'
🐿 Model Zoo: https://t.co/tOUoXQ36EC
∞ Learn DeepLabCut - Free Online Course: https://t.co/l4nCyyFLPM
👩🏾‍💻👨‍💻 DeepLabCut AI Residency: https://t.co/n6rDHxB8de

[名古屋大学｜Nagoya Univ. @NagoyaUniv_info]

☆研究成果☆

AIで魚の「バランス喪失」を自動検出
温度への強さを客観的に測る新システムを開発

▼プレスリリース
https://t.co/KwUwjkYGkJ

▼論文
https://t.co/g4dV5oBmCs

#中山友哉 #トランスフォーマティブ生命分子研究所 #生命農学研究科 #メダカ #温度耐性 #行動解析 #DeepLabCut #AI

[Gaurav Chattree @GChattree]

Using dual-color two-photon imaging, we monitored direct-pathway (dSPN) and indirect-pathway (iSPN) neurons simultaneously in awake behaving mice in baseline, parkinsonian, and dyskinetic conditions, with and without treatments @DeepLabCut

[DeepLabCut 🦄 @DeepLabCut]

@ShachafBen Gorgeous!!

[Shachaf Ben-Ezra @ShachafBen]

Thrilled to share our new paper in Current Biology! We combined automated behavioral tracking via @DeepLabCut with single-neuron DNA damage analysis to reveal how light pollution disrupts both sleep and genomic stability in reef fish schools.🐠 Link in the comments ⏬️

[DeepLabCut 🦄 @DeepLabCut]

🎂🥳 Wow! Happy 9 year anniversary of being published in @NatureNeuro #DeepLabCut 💜 - what an amazing adventure that first paper kicked off 🙏🏼 1.14M installations 💪

Original paper: https://t.co/J4G7ZPkIxD

[DeepLabCut 🦄 @DeepLabCut]

This is easily available within DeepLabCut!

https://t.co/7nK7M3iJqn

[Mackenzie Weygandt Mathis, PhD @TrackingActions]

🚨 ✨ New 3D pose estimation method from @mwmathislab! #FMPose3D allows for monocular (i.e. single camera) 2D ➡️ 3D 🔥

Led by @TiwangCS & w/@xiaoyu912huang #FMPose3D is SOTA on human & animal 3D benchmarks, & will be integrated into @DeepLabCut ⬇️👀

📝 https://t.co/wZ0sBNsgqL

[Ishwariya Venkatesh @Ishwariya13]

KiMA takes standard tracking output from @DeepLabCut and gives you a suite of analysis options in a web-interface that’s basically plug and play!

[DeepLabCut 🦄 @DeepLabCut]

🎂🥳 Wow! Happy 9 year anniversary of being published in @NatureNeuro #DeepLabCut 💜 - what an amazing adventure that first paper kicked off 🙏🏼 1.14M installations 💪

Original paper: https://t.co/J4G7ZPkIxD

[Mackenzie Weygandt Mathis, PhD @TrackingActions]

🥳 New work from my lab (@MLabofAI) just dropped on @arxiv! Measuring the shape of an animal can be highly useful for biomedical applications and for avatars 😎

We introduce *PRIMA*:🔥SOTA 2D➡️3D animal shape by @xiaoyu912huang, @TiwangCS & I!

📝 https://t.co/s7sA0Lup2S

[Mackenzie Weygandt Mathis, PhD @TrackingActions]

🚨 ✨ New 3D pose estimation method from @mwmathislab! #FMPose3D allows for monocular (i.e. single camera) 2D ➡️ 3D 🔥

Led by @TiwangCS & w/@xiaoyu912huang #FMPose3D is SOTA on human & animal 3D benchmarks, & will be integrated into @DeepLabCut ⬇️👀

📝 https://t.co/wZ0sBNsgqL

[DeepLabCut 🦄 @DeepLabCut]

@Debra_Brown_ You got this 🔥🕺🏼💃🏼💪

[羊土社 実験医学 @Yodosha_EM]

本書は、代表的なAIツール「DeepLabCut」の使い方も、PCのスペックなど初歩から丁寧に解説します😀

[DeepLabCut 🦄 @DeepLabCut]

@Yodosha_EM So cool - could you send us a link to the book?

[Hiroshi Matsui @compPsyHM]

New preprint out! 🐦
We show that crows dynamically adjust their feeding depending on what the other bird does, and the effect is asymmetric across dominance–subordinate ranks. Behavior tracking was done with DeepLabCut.@DeepLabCut
https://t.co/5NO4fNUjFX

[Nencki Open Lab @nencki]

We are super happy to announce the fifth edition of our Transatlantic Behavioural Neuroscience School, that will be held Aug 11-22nd in Poland! Join us to learn everything you need to build your behavioural setup with open source tools!

[Felipe Arruda Moura @lab_biomecanica]

Our new study in Sports Engineering shows that markerless athlete tracking using deep learning (@DeepLabCut ) achieves good–excellent validity vs. optoelectronic systems, with accurate estimates of player position and velocity.
https://t.co/FO4xf8wraB

[The Kavli Foundation @KavliFoundation]

AI tools like @DeepLabCut and SuperAnimal are changing how scientists study movement, helping them understand how brain activity drives behavior.

Read more: https://t.co/v0rlb3Ysey

@TrackingActions

[DeepLabCut 🦄 @DeepLabCut]

@Debra_Brown_ You can; please see all our demo notebooks for examples: https://t.co/JtG43kJRNp

[DeepLabCut 🦄 @DeepLabCut]

Happy Saturday!

Have you checked out our latest docs, with lots of new additions to explain #DLC3 (which is backwards compatible, so no fear, update!). Here is a quick start guide ⬇️

Full link to install docs: https://t.co/ysrH5LKrjt
SOTA model Guide🔥: https://t.co/PT7QrraDcn

[Nencki Open Lab @nencki]

@Nyktofob running a @DeepLabCut workshop for Heidelberg Open Lab!

[Jeniffer Sanguino Gómez @jsanguinogomez]

2/ Fear conditioning often scores a single behavior: freezing. We went further.
82 mice (2 cohorts). Early life stress (limited bedding and nesting).
🐭 @DeepLabCut , #SimBA & #keypointMoSeq to capture the full behavioral repertoire.