André Soares

🇵🇹 Staff scientist at the @ProbstLab @unidue doing all kinds of fun science! Once did a PhD at #faberystwyth 🏴󠁧󠁢󠁷󠁬󠁳󠁿

[André Soares @GeoMicroSoares]

Our preprint on fair reuse of public microbiome data is out as of yesterday on @biorxivpreprint! 🔥
Check it out here: https://t.co/wCPtUygdpi
We (@AlexJProbst, @FolkerMeyer, @LAHug_, @environmicrobio, @CristinaMorar20 & Anke Heyder) crucially thank the Data Reuse Consortium!!

[Tominaga K. (tomiken) @pacyc1841]

Improving metagenome binning by integrating intrinsic features and taxonomy | Nature Biotechnology https://t.co/EDPemI6qbe

[Jonathan Eisen @phylogenomics]

Colleague is looking for input on reducing library prep costs for metagenomic sequencing using Illumina DNA Prep kit. They ask "Has anyone successfully reduced library prep volumes without introducing bias? If so, how much reduction worked for you?"

[Ruiwen Hu, PhD @MicrobeCookie]

Phages drive the dissemination of antibiotic resistance genes by facilitating host adaptation to heavy metal stress | PNAS https://t.co/TpTZsNtSCa

[Cameron Thrash @jcamthrash]

Accurate plasmid reconstruction from metagenomics data using assembly–alignment graphs and contrastive learning https://t.co/kZmaZaUE02

[Keisuke Motone / 元根 啓佑 @KeisukeMotone]

Single-molecule identification of full-length proteins with single-amino-acid resolution using nanopores

https://t.co/995WnHugLh

[Cameron Thrash @jcamthrash]

Functional genomic signatures predict microbial culturability across the tree of life @USC_MEB @USC_earth https://t.co/5XwiYQeq7K

[Stephen Turner 🦋 @stephenturner.us @strnr]

Eukan: a fully automated nuclear genome annotation pipeline for less studied and divergent eukaryotes https://t.co/4eBMmt1DjV 🧬🖥️🧪 https://t.co/adPx5Qs9ss

[Alessandro Garritano @Alegarritano]

New review out in Annual Review of Marine Science! 🌊🧫 We explore how ammonia-oxidising microbes form symbioses with marine hosts - fueling the nitrogen cycle, fixing carbon, and possibly feeding their hosts. #Metagenomics 🧪 #Bioinformatics 🧬💻
https://t.co/qNAFL8MhQr

[Chris Seymour @iiSeymour]

Big performance upgrade in Dorado v1.1.0 with up to 30% increase in throughput for HAC models on Ampere, Ada, and Blackwell (single RTX 5090 > 1Tbase / day)!

https://t.co/vKNXnKS9JB

[Michael Henson, Ph.D. @HensonMW_08]

🧬 Interested in aquatic micro, nutrient cycling, river-ocean interfaces
I’m seeking a postdoc candidate to apply w/ me for the 2026 Walder Biota Fellowship ($70k+/yr 2 yrs, $20k/yr research).
Details:
More info 👉 https://t.co/z3IFfslJXy
Our Lab 👉 https://t.co/0YPv9Dqj9s

[André Soares @GeoMicroSoares]

@martycap_micro @FEMSmicro Awesome seeing you again Martina!! Looking forward to seeing more great cave microbiology in Slovenia 😁

[Jerónimo Rodríguez-Beltrán @Jero_RB]

🚨🚨New paper out!!!

Come for the first large-scale analysis of plasmid copy number across species,
stay for one of the most intriguing results of my lab: universal scaling laws in plasmid biology! 📈🧬

👉https://t.co/PXcg5l8oNC

[Timothy Fuqua @timothy_fuqua]

Hey y'all, I may be unemployed starting from October. If you have any leads on biotech / postdoc positions in the German-speaking part of Switzerland, I'd greatly appreciate a message. I'm great with Data Analysis, Molecular Biology, and Teaching. (Plz RT) https://t.co/8SI3OwFDhJ

[Cameron Thrash @jcamthrash]

Defining ultra-slow-growing extremophilic microorganisms as aeonophiles @USC_earth @USC_MEB https://t.co/iXgA88x3fp

[Robert Quinn @Quinn_Labs]

Spread the news!! I am organizing a new #Microbiome conference organized by @MicrobioSoc in Miami, FL 18-20 Feb, 2026. 'Microbes in Microbiomes' will merge the classic microbiology from the last century and modern microbiome science. Spread the word!! https://t.co/iM5IEFThcR

[Rogier Braakman @rogier_braakman]

‼️I'm looking for postdoc‼️Join effort using metagenomes to quantify microbial catabolic potential and carbon substrate availability at the ecosystem level. We seek to understand evolutionary forces shaping the C cycle. Part of https://t.co/Hqh7YXBWYH

https://t.co/UzRULvduS3

[Cameron Thrash @jcamthrash]

A new nitrogen biochemical process: Oxidization of ammonium into nitrogen gas using nitrate https://t.co/fUaEQdBrtf

[Kyle Tretina, Ph.D. @AllThingsApx]

BioAI hit a data wall 🧱BaseData tries to shatter it 💥

9.8 B 🧬 protein sequences + >1 M 🦠 unseen species, gathered with enforceable benefit-sharing 🤝, expand known diversity >10× 🌍

Next-gen bio-FMs just got rocket fuel 🚀

[A. Murat Eren (Meren) @merenbey]

We have a 3-year postdoc position in our group at the HIFMB to study plasmids and plasmids systems of the marine environment to survey their utility in microbial responses to environmental change. Please see the official job ad here and spread the word:

https://t.co/ADOI2xAZnF

[Cameron Thrash @jcamthrash]

Differential Expression of Core Metabolic Functions in Candidatus Altiarchaeum Inhabiting Distinct Subsurface Ecosystems https://t.co/ZKgh3S5qZx