Journal Club Bot

I'm a Bot. I post interesting papers. Maintained by @happy_khan

[Journal Club Bot @JC_pathogenomic]

Coding-Complete Genome Sequences of 40 SARS-CoV-2 Omicron XBB, XBB.1, and XBB.2 Sublineage Strains in Bangladesh. https://t.co/oher6dz4E2

[Journal Club Bot @JC_pathogenomic]

Factors associated with plasmid antibiotic resistance gene carriage revealed using large-scale multivariable analysis. https://t.co/ivqmzDH3jB

[Journal Club Bot @JC_pathogenomic]

Global disparities in SARS-CoV-2 genomic surveillance. https://t.co/Usm66oIKhB

[Journal Club Bot @JC_pathogenomic]

De novo identification of microbial contaminants in low microbial biomass microbiomes with Squeegee. https://t.co/eLcuFtrYJQ

[Journal Club Bot @JC_pathogenomic]

Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations. https://t.co/iCdshF6foJ

[Journal Club Bot @JC_pathogenomic]

Cov2clusters: genomic clustering of SARS-CoV-2 sequences. https://t.co/ml4nRZAx7N

[Journal Club Bot @JC_pathogenomic]

New rules for genomics-informed COVID-19 responses-Lessons learned from the first waves of the Omicron variant in Australia. https://t.co/PfQ7W6GO3E

[Journal Club Bot @JC_pathogenomic]

GyrB in silico mining in 27151 global gonococcal genomes from 1928-2021 combined with zoliflodacin in vitro testing of 71 international gonococcal isolates with different GyrB, ParC and ParE substitutions confirms high susceptibility. https://t.co/oK1LTMSnGS

[Journal Club Bot @JC_pathogenomic]

Structural and Genomic Evolution of RRNPPA Systems and Their Pheromone Signaling. https://t.co/gHOpnRtLLG

[Journal Club Bot @JC_pathogenomic]

Impact of host age on viral and bacterial communities in a waterbird population. https://t.co/RthVxBx67z

[Journal Club Bot @JC_pathogenomic]

MIDAS2: Metagenomic Intra-species Diversity Analysis System. https://t.co/npgzSiBqxP

[Journal Club Bot @JC_pathogenomic]

Genome-wide association studies identify an association of transferrin binding protein B variation and invasive serogroup Y meningococcal disease in older adults. https://t.co/vBnchn8kdr

[Journal Club Bot @JC_pathogenomic]

kmdiff, large-scale and user-friendly differential k-mer analyses. https://t.co/HviHTpXt1d

[Journal Club Bot @JC_pathogenomic]

Prevalence and risk factors of bacterial enteric pathogens in men who have sex with men: a cross-sectional study at the UK's largest sexual health service. https://t.co/CfI6tEcNbk

[Journal Club Bot @JC_pathogenomic]

CARD 2023: expanded curation, support for machine learning,and resistome prediction at the Comprehensive Antibiotic Resistance Database. https://t.co/VsU98H6UhJ

[Journal Club Bot @JC_pathogenomic]

COVID-19 cluster size and transmission rates in schools from crowdsourced case reports. https://t.co/bEBC1lfttz

[Journal Club Bot @JC_pathogenomic]

Phylodynamic signatures in the emergence of community-associated MRSA. https://t.co/8UQC7Txxt2

[Journal Club Bot @JC_pathogenomic]

Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data. https://t.co/8hQSqwqNl6

[Journal Club Bot @JC_pathogenomic]

The Anglo-Saxon migration and the formation of the early English gene pool. https://t.co/V2xAANN6EW

[Journal Club Bot @JC_pathogenomic]

Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into nature. https://t.co/0gPRLalT9f