Jakub Galgonek

[ELIXIR Czech Republic @ELIXIRCZ]

🇨🇿🤝🇨🇭 Proud to present ELIXIR IMPACT at the @SwissEmbassyCZ ! Together with our Czech and Swiss partners, we're connecting molecular, pathogen & clinical data with AI to advance personalised medicine and public health.
Thanks #svycarskyprogram, #swisscontribution, @msmtcr

[Jakub Galgonek @JGalgonek]

@zajdanek5 @Posledniskaut @bartkovskym Takže třeba takoví Markomani jsou podle vás prostě Keltové? No asi je nejvyšší čas tohle ukončit.

[Jakub Galgonek @JGalgonek]

@zajdanek5 @Posledniskaut @bartkovskym A při popisu různých kmenů rozlišoval mezi Kelty a Germány. Takže jak má ta zmínka o Ceasarovi dokazovat, že Slované nestřídají Germány, ale Kelty?

To že tu po Keltech přišli Germáni a až pak Slované se učí už na základní škole. Tak nevím, o čem tu vlastně debatujeme.

[Jakub Galgonek @JGalgonek]

@zajdanek5 @Posledniskaut @bartkovskym Tak tím, co píšete, jen dokládáte, že Caesar Germány a Kelty neztotožňoval, když je popisoval extra.

[Jakub Galgonek @JGalgonek]

@zajdanek5 @Posledniskaut @bartkovskym Už Římané považovali Germány za odlišné od Keltů. A byli to právě tihle Germáni, jenž například z Čech vytlačili ty zmíněné Boje. A to stovky let předtím, než tu pronikli první Slované.

[Jakub Galgonek @JGalgonek]

@zajdanek5 @Posledniskaut @bartkovskym Praotec Čech Kelty rozhodně nevyhnal, protože po Keltech tu byli ještě Germáni, až pak Slované. Mimochodem v Kosmově kronice se přímo píše o tom, že praotec Čech přivedl Čechy do Germánie.

[ELIXIR Czech Republic @ELIXIRCZ]

We are continuously working on improving our Integrated Database of
Small Molecules that employs Semantic Web technologies and is
accessible at https://t.co/WvIZLDGx3M. Recently, we achieved a
nice rating on YummyData, which monitors SPARQL
endpoints: https://t.co/WoZHqmzMNF.

[Jakub Galgonek @JGalgonek]

#IDSM (the small-molecule database developed by @ELIXIRCZ) now also allows you to search for small molecules by their mass spectrum via #SPARQL.
https://t.co/RQmU4WeymX

[Jakub Galgonek @JGalgonek]

As a member of @ELIXIRCZ, we would like to introduce you to our new review on making relational databases accessible via #SPARQL.

https://t.co/isGAqEF4ex

[Jerven Bolleman @jervenbolleman]

Using one query to link @ELIXIRCZ a idsm/sachem #SPARQL endpoint having #MolMeDB with @SwissLipids is fantastic. Connecting membranes to lipids data and on to @rhea,@uniprot and @chebit is real #FAIR #BioHackEU21

[UniProt @uniprot]

UniProt release 2021_04 is out with 225,578,953 proteins! Read the headline: ZTGC: bacteriophages reinvent the DNA alphabet and catch up on all our updates at https://t.co/U0aSm3PnXh

[Jakub Galgonek @JGalgonek]

Our new @ELIXIRCZ paper on the Integrated Database of Small Molecules: "IDSM ChemWebRDF: SPARQLing small-molecule datasets"

https://t.co/v0ZH6d18wJ

[Journal of Cheminformatics @jcheminf]

new: "IDSM ChemWebRDF: SPARQLing small-molecule datasets" https://t.co/Nzf9dlrL16

[neXtProt @neXtProt_news]

@egonwillighagen @emblebi @bigcat_UM @ChEMBL Happy to have ChEMBL #sparql back via the IDSM endpoint @ELIXIRCZ. Try our queries at https://t.co/ql5rHQwqBI #chemistry #compchem #drugdesign @egonwillighagen @JGalgonek

[Jakub Galgonek @JGalgonek]

IDSM - Integrated Database of Small Molecules
https://t.co/mQvZg6fZW4
https://t.co/La6rQZDWlQ

[Jakub Galgonek @JGalgonek]

@egonwillighagen @jervenbolleman @emblebi @bigcat_UM @ChEMBL @ELIXIRCZ @uniprot @rhea_db @ISBSIB @sparql No, the preprint is not available, but maybe you saw the paper as CHIN-D-21-00004.

[Jakub Galgonek @JGalgonek]

@egonwillighagen @jervenbolleman @emblebi @bigcat_UM @ChEMBL @ELIXIRCZ @uniprot @rhea_db @ISBSIB @sparql Yes, I can confirm that the text is correct. Nevertheless, just for completeness, IDSM supports also chemical similarity searching.

[Jakub Galgonek @JGalgonek]

@jervenbolleman @egonwillighagen @emblebi @bigcat_UM @ChEMBL @ELIXIRCZ @uniprot @rhea_db @ISBSIB @sparql Great, thank you. The SPARQL endpoint corresponding to the ChemWeb application (https://t.co/PoHnm68JMP) and containing ChEMBL data is https://t.co/ff9TTeQziI. We already submitted a paper describing it in detail. We hope that it will be published soon.

[Jakub Galgonek @JGalgonek]

@jervenbolleman @egonwillighagen @emblebi @bigcat_UM @ChEMBL @ELIXIRCZ @uniprot @rhea_db @ISBSIB Actually, the ChEMBL 27.0 dataset is already included in the IDSM SPARQL endpoint and the ChemWeb application.

[Jakub Galgonek @JGalgonek]

@egonwillighagen The 1st digit is a Sgroup type:
0=none,
1=SRU type,
2=monomer,
3=copolymer,
4=modification,
5=crosslink,
6=Mer type.

The 2nd digit is a Sgroup subtype:
0=none,
1=alternating,
2=random,
3=block.

The 3rd digits is a connectivity:
0=none,
1=head-to-tail,
2=head-to-head,
3=unknown.