Jason Yang

BMI PhD student @ University of Cincinnati, Cincinnati Children’s Hospital Medical Center

[OncoDaily @oncodaily]

Copper Drives Remodeling of Metabolic State and Progression of ccRCC
@ElizSMcKenna @CD_AACR @BehrouzShamsaei @JasonJuechen @dina_secic @jarek_meller @MariaFranciszka

https://t.co/pWOFzrKxF1

#AACR #Cancer #OncoDaily #Oncology #MedEd #MedX #MedNews

[Jason Yang @JasonJuechen]

@nsalomonis Thanks Nathan! Appreciate your help during my PhD!

[Jason Yang @JasonJuechen]

🎉 Thrilled to share that my first-author paper as a PhD student is officially in Cancer Discovery now:

https://t.co/W7oEwrry4e

Huge thanks to my mentors for their invaluable guidance, and to all my amazing collaborators for their support and insights throughout this journey.

[Jason Yang @JasonJuechen]

@pankajrajdeo01 Thx!

[Jason Yang @JasonJuechen]

First peer-reviewed paper during my PhD journey:
https://t.co/CelaGrKnXi
Welcoming comments and feedbacks

[bioRxiv Cancer Bio @biorxiv_cancer]

Copper drives remodeling of metabolic state and progression of clear cell renal cell carcinoma https://t.co/aGCXTMzK51 #biorxiv_cancer

[Jason Yang @JasonJuechen]

📚 Thrilled to share the first paper of my PhD journey! 📷 Welcoming feedback and comments. 📷#PhDLife #AcademicTwitter #Research
https://t.co/Aq2VP3FzIj.

[Jason Yang @JasonJuechen]

@ZhengSiyuan @eLife Congrats Siyuan and Nighat!

[Jason Yang @JasonJuechen]

@Kang_Jin__ @amazon 😂23333

[Kang Jin @Kang_Jin__]

Our recent work on COVID-19 single cell meta-analysis using ToppCell.
https://t.co/jkqJtc1mGC
Welcome to play with the data on ToppCell COVID-19 signature atlas on https://t.co/0E0V3W2IkL

[Guangyuan(Frank) LI @FrankLI55917967]

Happy to share our latest computational tool -- scTriangulate, leveraging cooperative game theory to mix-and-match diverse cluster boundaries to achieve the optimal clustering results! (1/n)https://t.co/Z2iSWloeuT

[Jason Yang @JasonJuechen]

@ZhengSiyuan Congrats!

[Oded Rechavi @OdedRechavi]

Every PhD https://t.co/3fV1UN6lK8

[Jason Yang @JasonJuechen]

A new database for children cancer PDX model query! https://t.co/sFH1ttHSv0

[Xi Chen @XiChenUoM]

ATAC peak calling with MACS2: I know this is a recurring problem but I got asked a few times recently, so I just put all info here for my own ref. We now routinely convert paired BAM to simple BED file and use "-f BED --shift -100 --extsize 200" for the peak calling. Why? 1/7

[Xiaole Shirley Liu @XShirleyLiu]

Very nice overview: Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data. https://t.co/y2Sjno496N

[Jean-Paul Courneya @JPCourneya]

@tangming2005 Have you checked out https://t.co/WQK0x2Hpwy that's a cool resource offered by embl provides link outs to publications using the tool and altmetrics.

[Ming "Tommy" Tang @tangming2005]

there are so many genome fasta and gtf files available from different resources: UCSC, Ensembl, genecode. which files are recommended for RNAseq and DNAseq alignment? Heng's post answered some of it https://t.co/IivSogOhch what about gtf, gtf should be compatible with fasta