Jose C Huguet-Tapia

Molecular microbiologist and Bioinformatician. University of Florida. Host-pathogen interactions. Food security. Opinions expressed are solely my own.

[Jose C Huguet-Tapia @Joxcar73]

@ocram

[Jose C Huguet-Tapia @Joxcar73]

@hilbertspaess @ocram

[Jose C Huguet-Tapia @Joxcar73]

@DanteZ030 @lcarrillopinto Tranquilo Maradona deja a la gente que promocione su deporte

[Jose C Huguet-Tapia @Joxcar73]

https://t.co/uSAh61hyFn

[NCBI @NCBI]

#GenBank release 265.0 is now available on the NCBI FTP site. This release has 41.96 trillion bases and 5.56 billion records! Learn more: https://t.co/I9C4Mr01dg

[Ming "Tommy" Tang @tangming2005]

String manipulation in Bash is a game-changer for bioinformatics & data processing. Rename files, extract substrings, and replace text—without external tools. Here’s how to do it efficiently 🧵👇

[NCBI @NCBI]

Important Update! As of December 2024, NCBI's pilot tool, Read assembly and Annotation Pipeline (RAPT) tool will no longer be available. We encourage you to check out NCBI’s suite of assembly and annotation tools. Learn more: https://t.co/Gx6B5OBfMa

[Oxford Nanopore @nanopore]

Scott Hickey shares why you no longer need Sanger sequencing for routine sequencing of amplicons, plasmids, bacterial isolates, & clone validation.

Nanopore technology is faster, has longer reads that provide superior coverage, and is more cost-effective. #nanoporeconf

Read here: https://t.co/s5CI9fZDmz

[Steve Marek @stephenmarek2]

Plant Pathology PhD research assistantship available at Washington State University

[ASM @ASMicrobiology]

🎉It's #InternationalWomensDay! Join us in recognizing the contributions of women in microbiology & allies championing equity, diversity & inclusion in science education & research. Explore influential #ASMJournals articles by women scientists: https://t.co/6qCQ8V3FhL

[Agristok @agristok]

📌 PhD Fully Funded Position in Soil Science or Environmental Chemistry at University of South Australia [open to international applicants] in Australia 🇦🇺... Please share and spread the word! For details visit: https://t.co/QpuAfa2Ed6

[Agristok @agristok]

📌 13 PhD Fully Funded Positions and 1 Postdoc Position in Maize🌱 Genetics, Farm Management, Nutrition, Economics and Soil Analysis in Stuttgart, Germany 🇩🇪... Please share and spread the word! For details visit: https://t.co/wTyHDtR8mc

[nature @Nature]

An egg-laying amphibian found in Brazil nourishes its newly hatched young with a fatty, milk-like substance https://t.co/PMveH1G9mn

[Nature Biotechnology @NatureBiotech]

AlphaFold2 and RoseTTAFold are limited to predicting the 3D structure of proteins. A new all-atom method models complete biomolecular assemblies, including proteins, nucleic acids, small molecules, metals, and covalent modifications. #NBThighlight https://t.co/a9relIlKLC

[TAIR @tairnews.bsky.social @tair_news]

Our update paper is out in Genetics!

https://t.co/n4YB9DMgV6

#arabidopsis #plantbiology #plantscience #database

[Nature Biotechnology @NatureBiotech]

The clustering algorithm FLSHclust identifies previously unknown CRISPR-linked systems using a mining approach with great potential for advancing biotechnology development in both research and the clinic. #NBThighlight https://t.co/XzK9OxtAu0

[Sadaf Shadan @sshadan]

Reporting @nature, researchers use genome editing for engineering broad-spectrum disease resistance in rice without a yield penalty. The gene concerned has a role in phospholipid biosynthesis.

https://t.co/UMLCfAnCyx

[antisense. @razoralign]

CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search https://t.co/7FOJAzpsxw

[Nicole Renke @NicoleRenke]

I am increasingly seeing sequencing companies marketing 20X-30X as sufficient for Whole-Genome Methylation Sequencing (based on WGS??). Drawing equivalencies between genetic and methylation seq depth requirements is problematic for a couple reasons (cont. in comments):

[Nature Biotechnology @NatureBiotech]

An appeal to EU legislators: prioritize scientifically informed decision-making over arbitrary rules that hinder innovation https://t.co/0lLtfkxwcA
https://t.co/SsUli7Eg0O