Shouchao Yan

JIF Rotation PhD Student interested in the biosynthesis and functions of legume natural products / Metabolomics / Osbourn group at John Innes Centre

[Mehdi Beniddir @BeniddirM]

It is with tremendous emotion that I share with you a community effort @jcheminf https://t.co/sOcWUoi8zx that resulted in the update of the MIADB @GNPS_UCSD and the generation of valuable spectrometric signatures that could be used as queries #MassQL 🙏@Adafede and S. Szwarc

[Pieter Dorrestein @Pdorrestein1]

This preprint allows for “explanation” of the ion forms using khipu ore annotation and conclude that the dark matter are mostly real compounds - still dark. They find less than 10% ISFs. In the end ISF prevalence is dependent on instrument tuning, type/amt of analyte, matrix, etc

[Shouchao Yan @KedderSc]

@AnneOsbourn1 Omg they are so cute

[Jenny Seohyun Jo @jenny_sjo]

🌸🧼We made the cover⚕️🌱

📢Check out the February issue of @nchembio✨️

The cover illustration is an antique soapwort drawing from Flora Londonensis (1835), one of the many beautiful rare books in the collection of @JIChistory @JohnInnesCentre 📜

[Gary Siuzdak @kadzuis]

AMMS 2025 book is live, the PDF just came available, and you can freely download the entire book here...
https://t.co/XbXQ8cmHAA
Two new chapters, new sections, and refinements throughout.

The royalty-free print version of #AMMS 2025 will be available on Amazon next week.

[Gary Siuzdak @kadzuis]

The latest version of Activity Metabolomics and Mass Spectrometry (AMMS 2025) is now in the proof stage. AMMS 2025 has two new chapters, lipids, and a lot of polishing. Still free as PDF, and royalty-free on Amazon.
Coming as soon as we get the proofs (and are happy with them).

[Pieter Dorrestein @Pdorrestein1]

Great example of metabolites discovered with molecular networking.

[John Innes Centre @JohnInnesCentre]

PRESS RELEASE - Could this fundamental discovery revolutionise fertiliser use in farming? 

Researchers have discovered a biological mechanism that makes plant roots more welcoming to beneficial soil microbes. 

https://t.co/zjjp2gyWDC

@NorwichResearch @charpentier_lab

[Yazhong Wang @YazhongXigua]

Breakthrough in crops! 🌱 🔥💥
Using prime editing, Xu Lab engineered heat-responsive genes to optimize source-sink relations in tomatoes & rice.
Higher yields (+33% 🍅, +25% 🌾) & climate-smart crops for a warming world!#CROCS
@CellCellPress
Link: https://t.co/NDQaKBs8Dp

[antisense. @razoralign]

iModMix: Integrative Module Analysis for Multi-omics Data https://t.co/FVxTQnun4q

[Christophe Duplais 🧪🪲🌾⌬ @chemistophe.bsky.socia @Chemistophe]

We are excited to share our work on the detoxification of solanidine, a steroidal alkaloid (StA) toxin☠️found in potato🥔, by a generalist insect🐛. 1/4 @CornellEnto

StA are present in nightshade plants of the genus Solanum (tomato, eggplant and potato).

https://t.co/J9BHbTzStE

[TrendsPlantSci @TrendsPlantSci]

Multiple layers of regulators emerge in the network controlling lateral root organogenesis https://t.co/Yp0nBcsFwk

[Hannah Hodgson @HannahHodgson93]

Delighted that our latest limonoid biosynthetic pathway work is now online @J_A_C_S !

We characterise a yield boosting ⬆️ enzyme involved in an acetyl protection/deprotection step, providing new insights into furan biosynthesis 🍋🌿

https://t.co/5iBG8ttA7l

[Tatsuya Nobori @nobolly]

Reverse engineering of the pattern recognition receptor FLS2 reveals key design principles of broader recognition spectra against evading flg22 epitopes https://t.co/OQlZissSHs

[Shouchao Yan @KedderSc]

Congratulations!!!!

[Justin van der Hooft @jjjvanderhooft]

#ProudPI in #CompMetabolomics - really great to see how this project came to fruition over the last 1.5 years - many congratulations 👏 🎉 to Kevin!! Thanks to @WU_BioInfo, @WURplant, @WUR for resources and funding! 😎 #metabolomics

[Mehdi Beniddir @BeniddirM]

So proud to share our recent chemical standpoint of emerging trends in plant natural products biosynthesis: https://t.co/WMIjZDH2WH Thank you @v_courdavault and @AnneOsbourn1 for the invitation. Congrats @SzwarcSarah @UnivParisSaclay @BioCIS

[Shouchao Yan @KedderSc]

Congratssssss!!!!! I’m so happy for you!!!!!! ❤️❤️❤️

[Isabel Monte @Isabel_MonteG]

I feel excited and honoured that @ERC_Research selected my project for funding! 🎉

With our #ERCStG "FRIENEMIES" we will investigate the #evolution of plant-fungus interactions from pathogenic to beneficial in land plants @ZMBP_Tuebingen @uni_tue

#EvoMPMI #PlantSci

[Laura Saavedra 🇺🇾 🇦🇷 @LauraLSaavedra]

Great work about the emergence of the CYP73 gene family as a foundational event in the development of the plant phenylpropanoid pathway. 👏 "An ancient role for CYP73 monooxygenases in phenylpropanoid biosynthesis and embryophyte development" https://t.co/clpn5pXuHL

[Ming Wang @mingxunwang]

I am very proud of a first year PhD student in my lab, Xianghu Wang, for his paper on how to improve molecular networking with graph topology algorithms just published in @J_ASMS! The whole process was both helpful for improving the manuscript and smooth.

[Hongyan Zhu @HongyanZhu1]

Excited to share our new publication: Species-specific microsymbiont discrimination mediated by a Medicago receptor kinase | Science Advances https://t.co/K028Z20jQc