Infectious diseases physician & medical microbiologist. Currently Clinical Investigator Program post-doctoral fellow in the Veyrier lab INRS-Armand Frappier.
@pmoyniha@_Matt_Hannah@vikasnavaratna Based on some recent work that @mbehr_mcgill, Vivek Kapur and I published (https://t.co/xdGoHAWqvP), we have a hierarchical genome alignment that can be used for orthology (some caveats including only some genomes). Feel free to reach out if I can help!
@pmoyniha@_Matt_Hannah@vikasnavaratna Hi, I have found that the high degree of identity within the MTBC sometimes confuses automated orthology software based on reciprocal best hits.