PASeq_HIV

PASeq is a cloud-based, scalable web service that provides automated data analysis for HIV genotyping from NGS high throughput data.

[PASeq_HIV @PASeq_HIV]

PASeq is a cloud-based web platform for HIV Drug Resistance Testing using NGS high throughput platforms. From the raw data to an HIV resistance report in a click!

[PASeq_HIV @PASeq_HIV]

400 users! Keep them coming!

[PASeq_HIV @PASeq_HIV]

Attending #ECCMID23 for a change! If you are using PASeq and want to meet, please DM!

[PASeq_HIV @PASeq_HIV]

Nice alternative for HIV-DR NGS-based data analysis. Built on Nextflow and for local execution!
https://t.co/fPLnu8kwbq

[PASeq_HIV @PASeq_HIV]

@BioMattUK Hi Matthew. I am afraid code is not available at this point. It needs some time to order it before publishing.

[IrsiCaixa @IrsiCaixa]

🔔 Today is the last day of the @mistralhiv Constortium Meeting 2022.

👥 For two days, the partners of the @HorizonEU project coordinated by #IrsiCaixa shared their scientific progress and updates on the study.

👏 Happy to be part of this great collaborative work!

[PASeq_HIV @PASeq_HIV]

35.000 jobs performed on genomic data analysis of both HIV-1 and SARS-CoV-2.

[PASeq_HIV @PASeq_HIV]

Happy to see the first publication on SARS-CoV-2 that uses PASeq for genomic data analysis in the ACTIV-2 trial! PASeq has been used to detect mutations in genomic datasets from mAb treated patients. https://t.co/uXuqKvQlHZ

[PASeq_HIV @PASeq_HIV]

We have upgraded the guts of PASeq. Users shouldn't notice anything! (hopefully)

[PASeq_HIV @PASeq_HIV]

Just reached 25.000 analyzed samples! Keep them coming!

[PASeq_HIV @PASeq_HIV]

PASeq has now processed more than 21.000 samples. Users from more than 30 countries. Early reacted to adapt to SARS-CoV-2 NGS data analysis needs and processed lots of those genomes. More coming! Bring it on!

[PASeq_HIV @PASeq_HIV]

Glad to help!

[Dr_Choudhary (वायरस वाले डॉक्टर) 🕉️🇮🇳 🇺🇸 @Dr_MChoudhary]

Amazingly good tool for minority variant analysis; adapted for SARS-CoV-2 now...

[PASeq_HIV @PASeq_HIV]

https://t.co/NLZJwaqMai can perform one-click cloud-based analysis for SARS-CoV-2 NGS data (illumina at present). Results consist of QC, consensus sequences, and amino acid variant list. Give it a try!

[Hyrax Biosciences @hyraxbio]

We're hiring! @hyraxbio is seeking a bus dev lead to join our team, applications close on 12th August. See more at https://t.co/suzmjYcylU #lifesciences #diagnostics #businessdevelopment #remotejobs

[PASeq_HIV @PASeq_HIV]

PASeq surpassed 17.000 analysis jobs! So happy! We are now working on data zoning, so your data is physically in specific data centers. Are you interested in additional PASeq features?

[ESCI-UPF @ESCIupf]

🗞️@alex6mo i @lauraserrar també han parlat amb @marc_noguera, investigador d'@IrsiCaixa, sobre com s'ha desenvolupat el software per seqüenciar el genoma del SARS-CoV-2 i sobre les futures línies d'investigació de la COVID-19 #ESCIUPFNews
https://t.co/4VeVKq68VS

[Xavier Solans @XSolansMonfort]

Glad to share that the work with @rubenmasb, @jaleman2 amd @seloxcat has just been accepted in @DaltonTrans. Thanks for inviting me to participate in this nice project. @CompBioNanoCat @qfuab

https://t.co/TzCE35xHXV

[PASeq_HIV @PASeq_HIV]

@SteveLaurie42 @crisrugn About the time, for consensus sequence only it is a fast process (15 minutes depending on coverage). If you want the full variant list it take some time (hours).

[PASeq_HIV @PASeq_HIV]

PASeq can now analyze NGS data from whole 2019-nCov genome! From the raw data to the genome sequence and spike variant list just in a click!

[PASeq_HIV @PASeq_HIV]

@SteveLaurie42 @crisrugn It is cloudbased so highly scalable and user friendly with Batch upload and download capabilities. Give It a try!

[PASeq_HIV @PASeq_HIV]

@roofeo24 Not at this time, Rupert! We plan to process MinION data as well soon!