Sam Sihvonen

Bioinformatician, computer scientist, founder&CEO
@solu_bio

Building the future of genomic surveillance. Results in minutes, no code.

[Solu Genomics @solu_bio]

🏥Akershus University Hospital modernised its genomic surveillance workflow with Solu🏥

Faced with a vancomycin-resistant E. faecium outbreak, the team replaced time-consuming command-line tools with real-time analysis.

Turnaround time dropped. Insight quality improved.

[Solu Genomics @solu_bio]

Boom! Improved phylogenetic tree visualizations in the Solu Platform! 🌲

Radial format, collapsible branches, and better text readability.

Easier and faster access to preventing epidemics with genomics.

Link to trial below

[Solu Genomics @solu_bio]

Solu just added a little (AI) magic to your genomic epidemiology work. 🧙

[Sam Sihvonen @SamSihvonen]

Itse lähden siitä, että jos kukaan ei koskaan kritisoi, ei oikeasti ole saavuttanut mitään

[Sam Sihvonen @SamSihvonen]

Saatiin näköjään ylennys nuorista lupauksista neroiksi! Kiitos!

https://t.co/bnmSVmUry8

[Solu Genomics @solu_bio]

New case study: Ultrafast outbreak detection with Solu & Nanopore sequencing 🚀

Scientists from from Awanui Labs Wellington and ESR developed a breakthrough outbreak detection model using Solu and Nanopore sequencing.

Link in reply!

[Solu Genomics @solu_bio]

New in our latest beta release: Instantly look up what the literature says about any gene or mutation, right inside Solu!

[Sam Sihvonen @SamSihvonen]

@jlsteenwyk @TimoJMoilanen Thank you @jlsteenwyk!!!

[🧬Jacob L Steenwyk @jlsteenwyk]

NEW Publication🥳 Solu enables easy genome-scale pathogen surveillance!

Solu is a real-time #pathogen surveillance platform. It automatically assembles, characterizes & compares WGS data—no bioinformatics expertise is required.

🔗: https://t.co/dfzszEAJtZ

[Solu Genomics @solu_bio]

We now automatically concatenate reads belonging to the same sample – simply upload your files and let the platform do the work.

[Oliver Schwengers 🇩🇪🇪🇺🇺🇦 @oschwengers1]

Excited to share BakRep - our latest work published in @MicrobioSoc #MGen

>661,000 bacterial genomes, uniformly characterized & annotated, enriched with metadata, accessible via a flexible search engine

https://t.co/UKGlI6xUAV

👇 1/7

[Timo Saratto (Moilanen) @TimoSaratto]

Candida app is expanding! We now offer AFR annotation for C. albicans, powered by #ChroQueTas & #FungAMR. Thanks @narmquijada & co for the amazing tool!

[Solu Genomics @solu_bio]

The newest #FungAMR & #ChroQueTas version for Candida albicans antifungal resistance mutations is now live in both Solu Platform and https://t.co/61SY2BFwDC!

[Solu Genomics @solu_bio]

New: Compare your sample to 2 million public genomes! ⚡️

When you upload a new sample to Solu Platform, we automatically compare it to all public pathogen genomes and show the closest matches.

Try it: https://t.co/k1lp1m4rOh

[Timo Saratto (Moilanen) @TimoSaratto]

It’s now live! Built on the wonderful AllTheBacteria database by @shenwei356, @johnlees6, @ZaminIqbal & co!

[Sam Sihvonen @SamSihvonen]

What an @IDWeekmtg! Our socks were a hit, we ran out in the first few hours! Fantastic meeting up with our customers from @CedarsSinai

[Timo Saratto (Moilanen) @TimoSaratto]

Really excited about the recent FungAMR/ChroQueTas preprint by @CamilleBed17, @narmquijada & co! We've now added it to our platform for C. albicans, making Solu the only web UI for ChroQueTas. Looking forward to expanding to other species!

[Sam Sihvonen @SamSihvonen]

We’ve heard your requests! A way to compare your samples to thousands, or even millions of NCBI samples on the Solu Platform!

https://t.co/orcmHPhNGi

[Timo Saratto (Moilanen) @TimoSaratto]

A cool upcoming feature: When you upload a sample to Solu Platform, we’ll search all public NCBI samples for related genomes. This is built on the awesome AllTheBacteria database by Martin Hunt, Leandro Lima, @shenwei356, @johnlees6 & @ZaminIqbal

[Sam Sihvonen @SamSihvonen]

@CamilleBed17 Fantastic!