1/15 Want to decode pathway activity in single cells?
Understand ssGSEA, GSVA, AUCell, and UCell—tools that score gene sets per cell. Here's how they work 🧵
Started a new tag on my blog to track stories about AI-powered security research, which is very much having a moment right now - 11 posts so far already https://t.co/rlEjS0Ho1h
Super excited to be launching two things today: #RustQC 🦀🧬 and https://t.co/3TQD6dpWTr 🚀
I used AI to rewrite 15 RNA-seq QC tools into a single Rust binary (I've never written any Rust). It ended up being over 60x faster. Here's the story 🧵
https://t.co/B6zYK6JX0g
@JoachimSchork Just be careful of the heuristics readr uses to guess column types. It can change your data in ways you don't expect. Read the documentation carefully.
Beware of Occam's Razor. The Datasaurus Dozen dataset has the same summary stats but very different structures when plotted. A dinosaur, stars, etc... are all the same if you trust Occam (the stats). The simplest explanation isn't always the best.
https://t.co/OduCOHJBIA
@tangming2005 to be pedantic, it returns :
ensembl_gene_id entrezgene_id external_gene_name
1 ENSG00000141510 7157 TP53
thank you for the tweet thread. I enjoy these.
@strnr I get this error on my Mac Sonoma when installing with brew:
$ tgv
-bash: /usr/local/bin/tgv: Bad CPU type in executable
anybody else seen this?