ethan evans

ml, comp chem, networks, time, hidden dynamics. nicely asking my computer to learn.

[Nina Hartrampf @NinaHartrampf]

Our preprint on “Merging Flow Synthesis and Enzymatic Maturation to Expand the Chemical Space of Lasso Peptides” is now available from @ChemRxiv 🧪🧫. Congratulations to first author Kevin Schiefelbein and everyone else involved 🥳

https://t.co/LUCMkGb4XA @Hartrampf_Lab

[Nina Hartrampf @NinaHartrampf]

Today our preprint on the development of a synthesis tag (SynTag) for chemical protein synthesis came out on ChemRxiv: https://t.co/01ZTI7GnwO 🥳

@Hartrampf_Lab @elysetwilliams @AlienorJeandin @UZH_Chemistry

[ethan evans @_e_evans]

@CesarAUribe Does our friend supply any guarantees for which hill we are running up?

[Jay Zhao @Shijie_Zhao]

Our paper on single-cell genomic sequencing of the human gut microbiome is now published in Science! Congrats to all of the amazing authors that I am proud to work with: @zheng_wenshan @ejalm @peterjameslu
@_e_evans @cdaili @animalkewls and David Weitz
https://t.co/ocuxLDUNax

[Angela Phillips @angphilli]

Thrilled to announce the Phillips lab is opening @UCSF in Sept! We’ll be developing high-throughput methods to examine how molecular properties of viral proteins & antibodies constrain their evolution/coevo. If interested in joining, please reach out! https://t.co/cJC2hHER3n

[ethan evans @_e_evans]

@CarlySchissel @ChemistryMIT great to see this, cant wait for the 40m presentation! that boot looks veeerrrryyyy familiar...what do you think @CesarAUribe. or did you win many more of those?

[ethan evans @_e_evans]

@DavidAngeles13 define boring...and how much is one heck? the biotech scene is pretty exciting i hear, maybe check it out?

[ethan evans @_e_evans]

such awesome news! i still get to come to lab and tell stories from boulder, right? ever figure out if you needed that mouse? 🐭💉🧪😉

[Jessica Rouge @Rouge_lab]

Delighted to share that I have been promoted to Associate Professor at @UConnChem @UConnCLAS. So grateful to my students, mentors and collaborators along the way who have helped make this moment possible. Looking forward to the next chapter and to more great science! #tenure

[Yu-Shan Lin @Yu_Shan_Lin]

My group, aka the YSL Lab at @TuftsUniversity (Medford, MA, USA), is looking for two postdoctoral researchers experienced in #MachineLearning and peptide molecular dynamics simulations to join us and work on #cyclicpeptide design or simulation analysis method development. (1/3)

[ethan evans @_e_evans]

@fiona_chembot yikes that's rough. i managed to delete my data + code + multiple dirs and then sync it all with s3, smoothly deleting my backup/storage all in one go (thx batch scripting ethan). was only ~1-2 weeks of compute/work but was still horrifying when i came in the next day.

[Marinka Zitnik @marinkazitnik]

Excited to share preprint on Therapeutics Data Commons!

Paper: https://t.co/9rOJ8AHko6
Website: https://t.co/1AjZDO69BD

TDC is a unifying framework across the entire range of #therapeutics #ML. Ecosystem of tools, leaderboards & community resr

66 ML-ready datasets
22 ML tasks

[Nina Hartrampf @NinaHartrampf]

📯Are you looking for a PhD position in chemical biology? 🧪🧫Would you like to work on the chemical synthesis of small regulatory proteins and evaluate them in biological assays? Then come and join us @UZH_Chemistry 🇨🇭:
https://t.co/4NVzgxImce (Please share!)

[Yu-Shan Lin @Yu_Shan_Lin]

Our review “Elucidating solution structures of cyclic peptides using molecular dynamics simulations" is published in @ACSChemRev! Certainly took a while (alright, a long time...) May it be helpful to anyone interested in modeling these cool molecules!

https://t.co/0bSECE0SDC

[Eric Alm @ejalm]

delighted to share this work by @Shijie_Zhao and @zheng_wenshan single-cell droplet based genomics for the human microbiome. strain-resolved genomes and HGT networks are among the benefits of this amazing new technology from David Weitz’s lab

[Jay Zhao @Shijie_Zhao]

High-throughput single-cell genomics for the human gut microbiome. A comprehensive list of strain-resolved genomes and much more! Proud of this work with Wenshan Zheng, @animalkewls @_e_evans @cdaili @peterjameslu @ejalm and David Weitz

[ethan evans @_e_evans]

@l_stelzl @uni_mainz @imbmainz wonderful news, huge congrats! can't wait to see your group's work.

[Eugen Hruška @HruskaEugen]

Adaptive sampling of proteins paper just published: Able to fold and get kinetics for up to 70+ residues. Software framework supports concurrent MD and analysis with #DL #ML. Scaling to 2000+ GPUs. Led by @CecClementi. #Compchem @LabRadical https://t.co/h8FbgnAomU

[ethan evans @_e_evans]

very happy to see this work w/ @ejalm, @david_sontag + a great team out in @SciReports! as usual i missed it for over a week. often removed 'nonsignificant' features frequently possess diagnostic info - use all and let the model pick. https://t.co/xgoyxKK06A #metabolomics

[César A. Uribe @CesarAUribe]

BIG news!💥I'm opening my lab @RiceECE and recruiting PhD/visiting students and Postdoc. Scope is broad but we like dist. optimization for ML, signal processing and control. Lab is new so lets grow together! Info https://t.co/pqsLjhY5rd
@cientificolatin @RiceGradSchool
#STEM

[Saeed Tavazoie @s_tavazoie]

Our new paper describing in vivo mRNA display is out in PNAS. A new technology developed by our brilliant Panos Oikonomou to perform whole-cell proteomics without mass-spectrometry! @s_tavazoie lab @pnasNews

https://t.co/2vuEYmzhUK