Aurore Comte

[South Green Bioinfo @green_bioinfo]

Last day of our science reproductible training : the best for last #Rmarkdown #jupyter_lab #quarto introduced by @DeneckerThomas 🧑‍💻from @IFB_Bioinfo ! Thank you Thomas for coming to Montpellier. And thanks to all participants for your patience 😜

[South Green Bioinfo @green_bioinfo]

Hier deuxième jour de formation science reproductible 🤩#snakemake avec Nicolas Fernandez @transvihmi et Gautier Sarah @AgapInstitut et début de #docker 👍 avec @Aurore_Comte @PHIM_research et @JulieOrjuela @LabDiade 🔥

[Aurore Comte @Aurore_Comte]

@green_bioinfo @transvihmi @AgapInstitut @phim @JulieOrjuela @LabDiade Le tag de phim cest: @PHIM_research

[Aurore Comte @Aurore_Comte]

Check our new CulebrONT release https://t.co/LVNF59es05 🐍🐍

[DNA & RNA research @AndGenomics]

Integrating Molecular Biology and Bioinformatics Education
https://t.co/7Iu4us7tXB

#Bioinformatics #OpenScience #DataScience #100DaysOfCode #WomenWhoCode #BigData #MachineLearning #serverless #Linux #Python #coding #SciComm #PhdChat #PhdLife #Rstats #Genomics #CompBioSkills #edu

[Aurore Comte @Aurore_Comte]

Culebront's 1rst anniversary 🍾 🐍 🎂with the release of the version 1.3.0 of CulebrONT pipeline: https://t.co/QILSsEpnuF
With a brand new repport. ❤️
Let's assemble genomes everyone!
@green_bioinfo @ItropBioinfo #snakemake @IFB_Bioinfo @nanopore

[Aurore Comte @Aurore_Comte]

C'est parti pour 4 jours de JOBIM2020 en virtuel! :)

[Aurore Comte @Aurore_Comte]

After months of confinement, we finally release with @JulieOrjuela the V1 of our snakemake pipeline: CulebrONT. 🍾🍾🍾
A tool to assemble and correct raw nanopore reads. It also provide help for choosing the best assembly.
https://t.co/ZiXE3vEe5e

[South Green Bioinfo @green_bioinfo]

Fin de la formation @ird_fr assemblage et annotation de transcrits par une partie sur l'expression différentielle. 📊🧮
Merci aux formateurs! @JulieOrjuela @ItropBioinfo et @r1corre @ABiMS_SBRoscoff pour cette formation au top! 😉

[South Green Bioinfo @green_bioinfo]

Starting our second day of our #Assembly and functional de novo #Transcriptome from #RNAseq data #Training. Go to quality check assembly! #Remapping and #BUSCO ! Lets go! #Bioinformatics at @ird_fr thanks @r1corre from @ABiMS_SBRoscoff to share your time with us! @IFB_Bioinfo

[South Green Bioinfo @green_bioinfo]

C'est parti pour la première journée de la formation assemblage et annotation de transcrits à l'@ird_fr! Pre-process et nettoyage des reads avec @r1corre @ABiMS_SBRoscoff @IFB_Bioinfo et @JulieOrjuela @ItropBioinfo

[Aurore Comte @Aurore_Comte]

@JulieOrjuela @francois_sabot

[South Green Bioinfo @green_bioinfo]

Hands on #phyloseq on #R package! Exploring OTUs tables. Obtaining rarefaction curves and calculating diversity indices 😎 with @fconstancias collaborateur from @Cirad.

[South Green Bioinfo @green_bioinfo]

Starting second day of our #metabarcoding trainig using #phyloseq on #FROGSSTAT and R packages #Bioconductor. @fconstancias @Aurore_Comte Frédérique Mahé and @JulieOrjuela. Multi-instituts forces between @ird_fr @cirad @BioversityInt @InraMontpellier. @ItropBioinfo @IFB_Bioinfo

[South Green Bioinfo @green_bioinfo]

Almost the end of the first morning of the #metabarcoding #training @ird_fr. @JulieOrjuela talking about #frogs preprocessing with command line #bash and @galaxyproject. @ItropBioinfo @IFB_Bioinfo

[South Green Bioinfo @green_bioinfo]

We are starting our #metabarcoding #training with Frédérique Mahé, @JulieOrjuela, @Aurore_Comte, @fconstancias and Guilhem Sempere using #HPC @ItropBioinfo at @ird_fr. Multi-instituts forces @Cirad @ird_fr @BioversityInt @IFB_Bioinfo https://t.co/XVFNn9lQ0W

[South Green Bioinfo @green_bioinfo]

We are starting our #RNASeq #course with @JulieOrjuela , @CathyBreton, Gautier Sarah, Sebastien Cunnac and @Aurore_Comte ! Supports are available on https://t.co/iwnSCtrEzp ! @BioversityInt @Cirad @ird_fr @ItropBioinfo @IFB_Bioinfo