VERY HAPPY to share our last publication in @GenomeBiology ...In a world full of SNPs...k-mers made the most biological sense out of the complex wheat genome! 🌱🧬
https://t.co/YuEiLdNqYY
Grateful to Benji (@benjamin_jaegle ) for the trust, & co-authors for their collaboration!
A team led by the @LeibnizIPK, incl. @Nils__Stein and @murukarthickj, reports a pangenome of barley comprising long-read sequence assemblies of 76 wild and domesticated genomes. The results were published in @Nature.
➡️PR: https://t.co/OPGj30Gnh6
➡️Paper: https://t.co/dtj63QWdkH
Excited to share our 36 years study of the wild wheat population of Ammiad! @biorxivpreprint https://t.co/Qlw4JWNqwY. It involved fun field work, benchwork and fascinating analysis at the lab of Avi Levy @WeizmannScience, in collaboration with @magnusnordborg @gmivienna 🧵👇(1/n)
@_Matt_Hannah @magnusnordborg The first approach was to use the coverage as an estimation for CNV and it work in a few cases and even gave a good GWAS hit but only for high CNV. Considering the sequencing depth I would exclude most seq errors. Considering the assembly denovo genomes will tell us
Extensive gene duplication in Arabidopsis revealed by pseudo-heterozygosity https://t.co/Wndd3lF1Yo
Finally submitted ;) thanks to all the authors ;) @malacopa_genome @rshanburns @lmayela_soto @magnusnordborg