CompSystBiol

[CompSystBiol @CompSystBiol]

Last paper from the lab, revealing how the "same" neurons transcriptionally and functionally differ depending on their position. "Translational profiling of mouse dopaminoceptive neurons reveals a role of PGE2 in dorsal striatum"
https://t.co/H7Sju1NuQN

[CompSystBiol @CompSystBiol]

In this new paper using imaging and modelling, we proposed a multi-step mechanism for mitophagy https://t.co/sELqcHXRmI
#autophagy #systbiol

[CompSystBiol @CompSystBiol]

Our new paper modelling the complex regulation of calcium signalling in synaptic plasticity is out https://t.co/G4Eq29dnQ5

[CompSystBiol @CompSystBiol]

Our paper with the @SanjaySinhaUK lab made the cover of @Dev_journal
https://t.co/DE8kG645wV
With a nice highlight too
https://t.co/kdP70IiBSx
Both bench and keyboard biology recognised :-)

[CompSystBiol @CompSystBiol]

Our first scRNAseq paper. Decrypting the regulation of epicardial heterogeneity. https://t.co/ygQwwkPum3… #stemcells #regenerativemedicine #cardiovascular

[CompSystBiol @CompSystBiol]

2nd version of our paper on #modelling #autophagy and #mitophagy is online
https://t.co/6RfOQCumIT

[CompSystBiol @CompSystBiol]

New paper: Epicardial cells derived from human embryonic stem cells augment cardiomyocyte-driven heart regeneration. https://t.co/OXDwTC4Npw #stemcells #regenerativemedicine #Cardiology

[CompSystBiol @CompSystBiol]

New paper on SBOL visual: Communicating Structure and Function in Synthetic Biology Diagrams https://t.co/7RwgLJhsgL #syntheticBiology #standards

[CompSystBiol @CompSystBiol]

New annual batch of standards specifications published in JIB, incl. SBML https://t.co/GkhyAviPQp and SBOLv https://t.co/eZcKHtZBQX

[CompSystBiol @CompSystBiol]

New paper showing how to use metabolomics to improve objective function for constraint-based modeling. Multi-Omics and Genome-Scale Modeling Reveal a Metabolic Shift During C. elegans Aging https://t.co/Ew32y8Jzzp

[CompSystBiol @CompSystBiol]

A consensus whole genome metabolic reconstruction is now available for Caenorhabditis elegans, developed by the #WormJam effort https://t.co/UYyiZmk7NH #recon #systbiol #FBA

[Nicolas Gambardella @NicGambardella]

"Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite" Now in BioRxiv https://t.co/ZuGK3kvNiF Super useful tool to improve your GSMM #systbiol #fba #sbml

[CompSystBiol @CompSystBiol]

Graphical representations of molecular mechanisms underpinning diseases can integrate large amounts of disparate knowledge and provide new systems-wide insights
https://t.co/im58fIrADn

[JIB @JIB_DeGruyter]

Our JIB Special Issue on #SystemsBiology is finally online, check it out 👉 https://t.co/ObaYiuySmC
#bioinformatics #sysbio #openaccess

[CompSystBiol @CompSystBiol]

Bioinformatician post-doc position to work on single cell omics for regenerative cardiovascular medicine. Collaboration between @BabrahamInst and Sinha Lab at the @SCICambridge https://t.co/8J89mTcMus

[JIB @JIB_DeGruyter]

The first two articles of our upcoming Special Issue on "Standards in Systems Biology" are online! 👏 @sbmlnews @mhucka
https://t.co/BfCTbGwmrz
#systemsbiology #sysbio #compbiol #modeling #sbml #openaccess

[JIB @JIB_DeGruyter]

New standard online 👉"Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3)": https://t.co/19jmx5vmVY @dagmarwaltemath @bergmannf @konigmatt @imbalrog @andreshouse @lenovere @Brett_Olivier #openaccess

[JIB @JIB_DeGruyter]

The new week starts with another article of our upcoming Issue on Standards in Systems Biology!
👉 https://t.co/ji0mqZOHaN
@SBOLstandard #SBOL #synbio #openaccess

[CompSystBiol @CompSystBiol]

Piero Dalle Pezze's repetitive analysis tool SBPIPE can now be used through R, via the sbpiper package https://t.co/qMisiF13Sl #simulation #estimation #systbiol

[CompSystBiol @CompSystBiol]

New post-doc position in the lab, to work on pathways mediating intra-neuronal transport of toxic aggregates in various neurodegenerative diseases. Apply at https://t.co/Ui79lGl3R6