CrCd

a father, a husband, a scientist

[Ardem Patapoutian @ardemp]

I wrote down my rules on how to Science. I hope you find it useful!

[Xavier Didelot @XavierDidelot]

Have you ever wondered if a lineage is expanding within a phylogeny? Now you can find out with our latest paper https://t.co/aXvZJ6g2ip and software https://t.co/YbnpGXB65B @DHelekal @alice_ledda_ @erikmvolz @DavidWYLLIE20 @HPRUged

[Pablo Iván Nikel @pabnik.bsky.social @PabloINik]

#Plasmid #toolbox for gene expression across Proteobacteria @NAR_Open
https://t.co/5EoVa0wP1p

[US Vaccine Tracker @USVaccineCount]

▓▓▓▓░░░░░░░░░░░░░░░░ 20.5%

[Andrew Croxford @andrew_croxford]

😳

[Houriiyah Tegally, PhD 🇲🇺 @houzhou]

so humbled to see our work published :)

[Kelly Wyres @KelWyres]

For any Kleborate fans out there, we present Kleborate-viz: an interactive visualisation app for Kleborate output w/wo #klebsiella isolate meta-data. Check it out here: https://t.co/DM9ho7yPOX

[Stephen Turner 🦋 @stephenturner.us @strnr]

Fast and sensitive taxonomic assignment to metagenomic contigs https://t.co/jDtUjLleYB https://t.co/1Ku9YF5GQg

[Stephen Turner 🦋 @stephenturner.us @strnr]

Flanker: a tool for comparative genomics of gene flanking regions https://t.co/sVznW0vrwL https://t.co/ctPlpqprJ1

[Genome Biology @GenomeBiology]

GeneWalk, from @robertietswaart, @fiddle and co, is a method for prioritizing genes from a gene list. Given a list of genes, eg from RNA-seq experiment, it constructs a regulatory network and uses GO annotations to identify the most relevant genes. https://t.co/4UpNkahzts

[The Banfield Lab @BanfieldLab]

Out today in Nature Biotechnology from @MattagenOlmics et al.: https://t.co/KfNoCq3PzF Studying microdiversity in metagenomes using inStrain!

[William Gibson @wgibson]

I can't believe I'm saying this this year, but I think this might be bigger than RNA vaccines.

DeepMind can effectively predict protein structure with the fidelity of crystallography.

https://t.co/HWeutGAsMK

[Rachel J Dutton @racheljdutton]

So excited to share the latest paper from my lab! This amazing work was led by grad student @emilycpierce and reveals the diverse impacts fungi have on bacteria! Wonderful collaboration with @DrLauraSanchez, @LupoLabs, @kit_ucsd, @TheKellerLab #cheese https://t.co/Z7J3njkiX6

[Rahul Satija @satijalab]

Thanks to @cziscience for highlighting our work! Their programs have helped create a culture of open code, open data, open protocols, and open science that is so important for single-cell genomics: https://t.co/pK3kRHmeIC

[John Dennehy 🇺🇦 @DrJDennehy]

It is unclear how important CRISPR-Cas systems are for protecting natural populations of bacteria against infections by mobile genetic elements https://t.co/GWKy8arQcd

[Ryan Wick @rrwick]

I recently wrote a choose-your-own-adventure guide for bacterial genome assembly! It can help you decide how to best assemble your bacterial whole-genome read set.
https://t.co/TA0CxcfcI7
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[CrCd @CrCdK]

Ggtree: a serialized data object for visualization of phylogenetic tree and annotation data https://t.co/NhfLO3tIOC

[𝘼𝙘𝙞𝙣𝙚𝙩𝙤𝙗𝙖𝙘𝙩𝙚𝙧 𝙗𝙖𝙪𝙢𝙖𝙣𝙣𝙞𝙞 @A_baumannii]

Scarless removal of large resistance island AbaR results in antibiotic susceptibility and increased natural transformability in Acinetobacter baumannii https://t.co/NOVUIkf4fX https://t.co/HF7NaW1Ct8 https://t.co/X1n7DVHgYI https://t.co/dFsSOnYzH3

[Akos T. Kovacs @EvolvedBiofilm]

Host specificity of microbiome assembly and its fitness effects in phytoplankton

-in @ISMEJournal from @VJDenef

https://t.co/3szMwnlkkT