E. Hauptfeld

[Nature Communications @NatureComms]

.@EHauptfeld @BEDutilh and colleagues @UniUtrecht @UniJena present RAT, a tool that integrates taxonomic signals from reads, contigs, and MAGs into one profile. #metagenomics #microbiology #BiotechNatureComms

https://t.co/WFclxIBJkC

[E. Hauptfeld @EHauptfeld]

I am excited to share that the second chapter of my PhD has been published! The Read Annotation Tool RAT integrates taxonomic signals from reads, contigs, and MAGs into one taxonomic profile.
I am particularly proud that RAT is now online at @NatureComms
https://t.co/dgJVZRSOwc

[E. Hauptfeld @EHauptfeld]

I also got to present my poster about the RAT at #abacbs2023! These Australians really know how to conference!

[E. Hauptfeld @EHauptfeld]

Today, I got to talk about RAT in Brisbane at #abacbs2023 ! Such a great experience to get to present my research on the other end of the world!

[E. Hauptfeld @EHauptfeld]

@BinfUtrecht @phyTorres @WUR @MFSeidl @DerDunk Congratulations Dr. @phyTorres ! We will miss you in the office!

[Michael F Seidl @MFSeidl]

Amazing achievement! @EHauptfeld #LenaWill @UUBeta get price for best 1st year course in the biology curriculum

[E. Hauptfeld @EHauptfeld]

@MFSeidl @UUBeta Thank you! And thanks to @BEDutilh for suggesting me as a teacher and everyone at @BinfUtrecht for their continuous support!

[Universität Jena @UniJena]

Scientists @UniJena and @UniUtrecht have developed a novel data-driven method to describe ecological niches of #microorganisms. Led by @BEDutilh @microverse_exc, the team presents the first "map of the microverse" in @NatureEcoEvo.

➡️ https://t.co/EUeolU1EqL

[NatureEcoEvo @NatureEcoEvo]

A social niche breadth score reveals niche range strategies of generalists and specialists https://t.co/Ebfg8d6Px2

[Faculty of Science, Utrecht University @UUBeta]

Bastiaan von Meijenfeldt, Paulien Hogeweg and @BEDutilh developed a new method to distinguish generalist and specialist microbes and found that even in their own environment, specialist microbes are dominated by generalists. @NatureEcoEvo

https://t.co/TOLtbs3irI

[Paul Rivarez @ViromeHunter]

ASTONISHING! Check this work from @BEDutilh et al.!

"...where specialists have
relatively small genomes in habitats with low local diversity, but relatively large genomes in
habitats with high local diversity."

https://t.co/HAx4oVoUyV

[Theoretical Biology & Bioinformatics @ UU @BinfUtrecht]

Today at 16:19, @EHauptfeld will talk about the recently published #bioinformatics study about the #Griftpark on @BNR #wetenschapvandaag. Tune in at https://t.co/zgMGAqcGxw or listen to the recording at https://t.co/B3aE4wAuII
@DeltaresNL @GemeenteUtrecht @RHDHV_NL @UUBeta

[Faculty of Science, Utrecht University @UUBeta]

Gifafbrekende bacteriën #Griftpark #Utrecht bekend via #metagenomics. @UniUtrecht @DeltaresNL @RHDHV_NL @GemeenteUtrecht @BEDutilh https://t.co/f2sKptroW8

[E. Hauptfeld @EHauptfeld]

The first chapter of my PhD thesis is now published! We analyzed the microbial composition of a groundwater remediation pipeline and found the order of bacteria that dominates the remediation process. It is open access in Water Research!
https://t.co/uYjKg50b5I

[E. Hauptfeld @EHauptfeld]

@RD_Denton @linsalrob sent!

[E. Hauptfeld @EHauptfeld]

@julopessouzas @linsalrob done!

[E. Hauptfeld @EHauptfeld]

@thesteinegger @linsalrob I've emailed it to you as well!

[Theoretical Biology & Bioinformatics @ UU @BinfUtrecht]

Yesterday we had a wonderful (if bittersweet) seminar to celebrate Prof. dr. @BEDutilh's new appointment as professor of viral ecology @microverse_exc @UniJena. Great talks by @linsalrob, Daniel Garza, Marleen Balvert, Fabiano Thompson and Martijn Huijnen that ...