aeonsim

Scientist, animal genomics and bioinformatics at massive scale.

@[email protected]

[aeonsim @eonsim]

Having fun with Rust's std::simd for working with genomic data. Same algorithm just scalar or a single SIMD version with different compiler settings:
Scalar: 1900ns (1x)
SSE4.2: 159ns (12x)
AVX2: 123ns (15.4x)
AVX512: 87ns (21.8x)
#rust #genomics #science #bioinformatics

[Linus Tech Tips @LinusTech]

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[Linus Tech Tips @LinusTech]

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[aeonsim @eonsim]

@NZStuff @NZStuff can someone please turn off the music on the live stream! And if you are going to show the video please turn it on!

[aeonsim @eonsim]

#NovaSeqX is looking for something new to sequence... @illumina #qrw2023

[aeonsim @eonsim]

#qrw2023 #NovaSeqX @illumina

[Anthony Beckhouse @AntoBeck]

Kiwi scientists are not only super smart, they are creative. Check out this costume from #LIC team members using @illumina flow cells and #infinium arrays! #NovaSeq #iSeq #QRW2023 #fashionomics

[aeonsim @eonsim]

Know anyone interested in doing a funded PhD in methane reduction in Dairy cattle? An excellent chance to have a direct impact on reducing the GHG impact of Dairy cattle: https://t.co/Oc0FfzjaVl #Job #PhD #Scholarships #ClimateCrisis #NZ

[Linus Tech Tips @LinusTech]

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[aeonsim @eonsim]

@hippopedoid @wolfgangkhuber @seankenneths You can use Arbitrary Precision libraries in many languages. In python they're very easy to use just import the mpmath module and your numbers are only limited by the amount of RAM on your computer. https://t.co/TM92Z9zTYT

[A Chaotic Good @NeuroPoetica]

My only commentary. #titanicsub #Titan #OceanGate #implosion

[Walter Lim @iWaltzAround]

Been working on a little tax receipt calculator using stats from the latest budget - check it out at https://t.co/CypbJ4sk5y

[aeonsim @eonsim]

Got a science background and DevOps skills looking for a job? We want someone to help us build scientific data and computing infrastructure for our massive and rapidly growing population scale Genotype, Phenotype and Sequence research datasets #Jobs
https://t.co/ZNX64iNlGY

[aeonsim @eonsim]

@dan_brunskill @interestnz @businessdesk_nz Congrats!

[aeonsim @eonsim]

@HusseySG @mscienceaustnz Sure you can use it for that purpose.

[aeonsim @eonsim]

Lovely weather from the day before #QRW2022

[aeonsim @eonsim]

#eqnz very very mild in the tron...

[aeonsim @eonsim]

@drjulie_b :D best of both worlds!

[aeonsim @eonsim]

@drjulie_b Nice, not the traditional Mayo? Though I'd favor Boulet à la Liégeoise while in Belgium (assuming not vegetarian)

[aeonsim @eonsim]

@drjulie_b MediaMarkt https://t.co/VqjKZKnz37 would be likely option, certainly would have been where I'd have gone when living there.

[aeonsim @eonsim]

@tuitree Merry Christmas to the three of you as well!