Germinate Hub

Germinate provides a fully featured open-source plant genetic resources platform #germinate #bioinformatics #pgr @HuttonICS @cropgeeks @JamesHuttonInst

[The Crop Trust @CropTrust]

GridScore NEXT is a new open-source field app that helps plant scientists collect accurate phenotypic data, reduce errors, and speed up pre-breeding and characterization.

Learn more in the new paper 📄 https://t.co/gyCQygjAsd

#BOLDProject

[Germinate Hub @GerminateHub]

Going forwards, all Germinate communications will be published via #Bluesky
This will be the last post on this platform.

Why not give us a follow there?
https://t.co/BWEhYKCXdo

[Malcolm Macaulay @malcolmacaulay]

The @JamesHuttonInst @best_crop project team produced very cool stickers to promote our work using the Germinate database.
Find out more here: https://t.co/D5P4MLRapa

[Paul Shaw @pauldshaw]

Join our @BreedingValue webinar tomorrow morning at 9:30am GMT where @bazraubach will talk about the work we have been doing at @jameshuttoninst on creating a central @GerminateHub database to store experiemental data. More info https://t.co/MsatubO0Y9

[Paul Shaw @pauldshaw]

We (@BazRaubach and I) have been running training today on @GerminateHub and #gridscore at the @emblebi training course 'Plant genomes: from data to discovery'. Participants from all around the world learning about the tools we develop at @IntBarleyHub @JamesHuttonInst

[Germinate Hub @GerminateHub]

Find us on #bluesky at https://t.co/f7RGsZEtKN

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

We've got some exciting new features coming in the next big release of #GridScore like providing trait reference images, self-hosting a GridScore server and new export formats!
Stay tuned for the new release soon.
#phenotyping #bioinformatics
@HuttonICS
https://t.co/G1RJ6JimnZ

[Germinate Hub @GerminateHub]

As part of an upcoming new release of #Germinate, we're looking into spider/radar charts. These are very useful for sensory data, but are also more generally useful for #trials data.

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

That's all for now! But there'll be many more things to look forward to in the near future, so keep an eye out!

In the meantime, why not check out the new cow trial or any of the other new features?

7/7

https://t.co/G1RJ6JimnZ

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

⛶ A new setting will let you choose if you want the stepper buttons next to a whole number input to be bigger. This can be useful if you're using it for counting. We're working on adding vibration feedback as well. 📳

6/7

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

🗓️ The trait data history view has been updated to fix issues and show the historic data in a more useful way.

5/7

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

🗺️ A new example trial has been added showcasing the new GPS trait as well as a different use-case for GridScore where we scored data on cows.

4/7

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

🏷️Two new trait types have been added in the form of a GPS trait and an image trait. These let you record the GPS position of an entity and take pictures of it respectively.

3/7

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

📈 We've added a germplasm performance page so you can see how a particular germplasm compares to the rest of the trial on a trait by trait basis.

2/7

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

Happy to announce another update to #GridScore for even more #phenotyping goodness. Have a look through the thread for more details.

https://t.co/G1RJ6JimnZ

1/7

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

A new version of #GridScore is out. Check out this
🧵for some highlights!

#phenotyping #boldcwr
@CropTrust @HuttonICS

1/6

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

We only just released a new version with lots of features, but development never stops!
Next feature coming soon is a germplasm performance page showing how well a germplasm performs against the rest of the trial per trait.

#phenotyping #GridScore

[International Barley Hub @IntBarleyHub]

Great blog from @BazRaubach, who was invited to present his work on #bioinformatics research software development, at @LeibnizIPK.

The visit included a tour of the PhenoSphere – chambers in which environmental conditions can be strictly controlled.

More: https://t.co/qsf2Hq4JOM

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

Why not check out the new version? 3/3 https://t.co/G1RJ6JimnZ

[Sebastian Raubach @BazRaubach.bsky.social @BazRaubach]

Thanks to our collaboration with @lucernebreeder as part of #BoldCWR @CropTrust we have added support for highlighting of controls/checks in the data input as well as visualizations. Thanks to @MichaelMajorMed for the last photo.
2/3