#DIOPT - Twitter Hashtag

Alliance of Genome Resources @alliancegenome

almost 3 years ago

We've added a new Paralogy section to Gene pages. Like Orthology, the Paralogy data are sourced from the DRSC’s #DIOPT https://t.co/I072UuYM16 tool. Each table is ranked based on similarity, identity, alignment length, & a count of algorithms used to predict a paralogous match.

alliancegenome's tweet photo. We've added a new Paralogy section to Gene pages. Like Orthology, the Paralogy data are sourced from the DRSC’s #DIOPT https://t.co/I072UuYM16 tool. Each table is ranked based on similarity, identity, alignment length, & a count of algorithms used to predict a paralogous match. https://t.co/Ok8h639Nzo

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SGD Project @[email protected] (bsky too) @yeastgenome

almost 3 years ago

#Homology calls in SGD are sourced thru Alliance of #Genome Resources (SGD is founding member!), via #DIOPT via @FlyBaseDotOrg; data can be downloaded from @alliancegenome Downloads site https://t.co/JeEbTaGGXr for #yeast #human #mouse #rat #zebrafish #fly #worm #frog

yeastgenome's tweet photo. #Homology calls in SGD are sourced thru Alliance of #Genome Resources (SGD is founding member!), via #DIOPT via @FlyBaseDotOrg; data can be downloaded from @alliancegenome Downloads site https://t.co/JeEbTaGGXr for #yeast #human #mouse #rat #zebrafish #fly #worm #frog https://t.co/M5gHrDBeZN

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FlyBase @FlyBaseDotOrg

about 3 years ago

#DIOPT 9.1 now also includes predictions for A. gambiae (African malaria mosquito) and E. coli. (Thanks to @rmwaterhouse for doing a release tweet for us!) @DRSC_TRiP

Rob Waterhouse also @rmwaterhouse.bsky.social @rmwaterhouse

about 3 years ago

@FlyBaseDotOrg Updated DRSC Integrative Ortholog Prediction Tool (DIOPT) to v9.1. including the following orthology prediction algorithms: Compara, eggNOG, Hieranoid, Homologene, InParanoid, OMA, OrthoDB, OrthoFinder, OrthoInspector, OrthoMCL, Panther, Phylome, SonicParanoid, and Domainoid.

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Arthur Luhur @aluhur

about 7 years ago

if you work on #Parkinson model in #drosophila, and wanted to find human VPS35 #cDNA or make pathogenic variants, a quick keyword search on #DGRC website will bring you to the UAS-human reagent. #DIOPT score 10/12.

aluhur's tweet photo. if you work on #Parkinson model in #drosophila, and wanted to find human VPS35 #cDNA or make pathogenic variants, a quick keyword search on #DGRC website will bring you to the UAS-human reagent. #DIOPT score 10/12. https://t.co/IPT3vEdc5F

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