Top Tweets for #DeepImageJ
#FunFact: The SAMJ idea was conceived during fruitful discussions with @Daniel_Sage_ at #MiFoBio2023 and materialized thanks to the #DeepImageJ Hackathon organized by @cfusterbarcelo and @ArrateMunoz.
Use SAM-like models in Fiji, finally.🥳🥳
I am pleased to introduce the early version of SAMJ, a plugin that enables semi-automatic annotation of microscopy images using Segment Anything Models.
No GPU required(!!)
Link to plugin page: https://t.co/Acv3xlGMMs
Estibaliz Gómez de Mariscal @gomez_mariscal works in @HenriquesLab at @IGCiencia. She studies cell-live biology using #BioImageAnalysis and she is one of the creators of #deepImageJ.
Register for the #DL4MIA course here by 4 Aug 👉 https://t.co/DZxW9RJQIj!
🙏 Big thanks to the incredible #deepImageJ team for this amazing announcement! I am overjoyed to have been a part of this journey. 🎉 Check all new features and enhancements! 🚀
Soon it will be integrated into #Icy and ImageJ/Fiji (via #deepImageJ) boosting their image analysis capabilities.
For more information, please visit the official GitHub repository: https://t.co/oNomhtoHXJ
Or link to the preprint: https://t.co/Lz7os3EUng
And the boom of #userfriendly tools for #DL @bioimageio #ZeroCostDL4Mic #deepImageJ @deepImageJ @AI4LifeTeam
There we go together with @DanielSage_ in @NEUBIAS_ for Zero-Code Deep Learning tools for #BIA! Will we get the challenge of training a #DLmodel from scratch in an hour? 🍬
Hi everyone! We are on Twitter now! #deepImageJ
@HenriquesLab @Damon_Poburko @guijacquemet Thx Ricardo and good question @Damon_Poburko we've (#deepImageJ, #Icy, @bioimageio) been working on this, and hopefully, in a couple of weeks, you'll be able to use all these updated models in Fiji 😎 to spoiler a bit, it's working, we're dealing with last cosmetics
🔬🖥️🤩 @gomez_mariscal in #EMBOCOBio2022 presenting her pioneering work with #DeepImageJ and contributions to #ZeroCostDL4Mic. Then diving into building a community at #BioImageModelZoo. She's one of the unsung heroes of the course, teaching in nearly every training section
@florianjug giving an outstanding #EMBOCOBio2022 talk, highlighting #CARE, #Noise2Void and several denoising methods they've pioneered since. Also, some both amazing and hilarious examples of the current state-of-the-art of #DeepLearning, plus what we should expect to see coming
If further interested, defining your data augmentation image generators and exporting your model to #deepImageJ. It also links with more advanced tutorials and resources (don't let the learning curve slowing down 🤭)
Preparing some crazy 🤯 🤸♀️exercises with #zerocostdl4mic #deepimagej #bioimagemodelzoo #trackmate #stardist #morpholibj #celltrackingchallenge for the introduction to DL session 🤓 at @Neurophotonics @CERVO_ULaval
Kudos to all developers and all the partners. Special at heart @gomez_mariscal who, among many things, did an amazing job at contributing towards integrating both #ZeroCostDL4Mic and #deepImageJ into #BioImageModelZoo
#FOM22 slides already out of the oven😎 Want to know more about #reproducibleDL? don't you know yet about #deepImageJ #ZeroCostDL4Mic #BioImageModelZoo? Want to feed your creativity to build DL-based BIA workflows? Tomorrow, 12:55-14:10 in the Image Analysis Methods session RoomD
Behind #deepimagej paper🍿: @DanielSage_ and @ArrateMunoz share perspectives about making deep-learning based #imageprocessing accessible through #userfriendly tools📖
Deep Learning for Bio-Image Analysis in one Click https://t.co/ngka1r6Yq1 #method #protocol
@EPFL_en @uc3m
Want to know some stories behind the #deepImageJ paper?😏🍿 Check out the post "DeepImageJ: Deep learning in bioimage analysis for dummies" in @focalplane_jcs 🌟🔬
https://t.co/xsEGCTCKF9
📢New post on FocalPlane:
Want to use deep learning for your image analysis? Learn about DeepImageJ, a user-friendly tool to run DL models in ImageJ, by @gomez_mariscal @ArrateMunoz @DanielSage_ & Cristina de-la-Torre-Gutiérrez
https://t.co/W3c1zVLW3k
Thank you to #bii21 by @institutpasteur for letting us showing #deepImageJ extensively and listen extremely interesting Q&A. It's very nice to share the slot with @f_levet (#PoCA) and Chi-Li Chiu (@napari_imagin), after the great @Prof_Lundberg and Jong Chul Ye 😍
Software/Visualization/Applications/Benchmarking sesión at BioImage Informatics 2021. Great presentation about deepImageJ and BioImage Model Zoo by @gomez_mariscal
@jmutterer @DanielSage_ with #deepImageJ Try it it's very easy and it's a very good start of using deep learning models ! https://t.co/dtBDLYvNhJ
@fab_cordelieres @BertrandVernay @RTMFM1 Very informative session ! Some new tools and strategies for annotations and even more 😊 very well placed after seeing how to use existing models in the morning (#deepImageJ) and tomorrow with #ZeroCostDL4Mic how to train our own model 😃
After a practical session about #deepImageJ, we now jump to a nice presentation by @martweig about #CARE and #StarDist . #ANF_DL4MIC
I've seen #deepImageJ demo/presentations I was impressed, after using it I'm still impressed and completely conquered 😎🤘and the organisation of each model with pretreatment macro, model images, etc. this is a must it should be a must to do 🤩
After first day with basis teach by David Rousseau and practice on @ilastik_team with @romainGuiet today it's about #deepImageJ with Daniel Sage, deep learning model used on @FijiSc #imageJ, very interesting history, very useful !
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