Top Tweets for #GLUEtools
Thank you to @TodtDaniel and Ruhr University Bochum for inviting to speak at their virology seminar series. #Flavivirus #VirusEvolution #GlueTools
For future #covGLUE, #hcvGLUE, #rabvGLUE, #hbvGLUE, #btvGLUE and other #GLUEtools updates, please follow @CVRbioinfo
Live updates of HCV-GLUE, HBV-GLUE and RABV-GLUE have been temporarily disabled to preserve compute resources for COV-GLUE. We will restore these when possible.
#glueTools @CVRbioinfo
Please check out CoV-GLUE - an online #coronavirus resource that aims to facilitate comparative genomic analysis of the COVID-19 virus.
#SARS_COV_2 #COVID19 #Genomics #Bioinformatics #Evolution #VirusEvolution #GlueTools
NOTICE: We are not able to update the Docker version of GLUE at the moment due to VPN issues arising from working at home so it remains on an earlier version. Will attempt to fix this when possible. The native version on the website is up to date. #GLUEtools
In #covGlue we can also see that spike protein replacement D614G now appears in two clusters, although one is a singleton at the moment.
https://t.co/VAgWvgRNBu
#COVID19 #GLUEtools @CVRbioinfo #SARSCoV2
In #covGlue we can also see that spike protein replacement D614G now appears in two clusters, although one is a singleton at the moment.
https://t.co/VAgWvgRNBu
#COVID19 #GLUEtools @CVRbioinfo #SARSCoV2
CoV-GLUE dataset updated to 2nd March 2020, Now 159 full genomes of #SARSCoV2 thanks to GISAID. NSP6 replacement L37F now in 4 distinct clusters, each cluster with > 1 sample.
https://t.co/YI3Z3PDmzb
#COVID19 #GLUEtools @CVRbioinfo #covGlue
HBV-GLUE now live on the web -- a new resource for #HBV sequence data, based on #GLUEtools.
https://t.co/qHbCNPE9b2
#hbvGlue
Students and staff at @CVRinfo hard at work learning the #GLUEtools command line in our annual half day tutorial.
https://t.co/6IDVQEgF0Y
Now GLUE can interpret viral deep sequencing data e.g. Resistance associated substitution to antivirals in the #HepC genome; you just need a sam/bam file and GLUE software toolkit. Check the paper or contact the mind behind #GLUEtools @joshWentViral https://t.co/q4wvFFNex4
GLUE can interpret viral deep sequencing data, using per-read translation:
https://t.co/moR0h6Vkhc
Big thanks to collaborators at @CVRinfo, @PHE_uk and @NDMOxford.
Get in touch if you would like to use this aspect of #GLUEtools on #hepatitisC or any other virus.
There's a few days left (14th March deadline) to apply for our bioinformatics post on HIV-1 detection and evolution at the Centre for Virus Research - Glasgow https://t.co/lxVqLdnQkT #HIV #Evolution #GLUEtools #bioinformatics
The #GLUEtools journal paper has been published in BMC Bioinformatics!
https://t.co/xCWWWzbvEG
Any feedback appreciated!
@Paleovirologist @blJOg @emcat1 @CVRbioinfo @CVRinfo
Alexander, Derek and Kiki are working through the brand new half-day #GLUEtools tutorial I have developed.
New web interface for our #GLUEtools project for #rabies virus developed by @Paleovirologist @joshWentViral: https://t.co/biSFHZfzot ! Great tool to genotype, analyse and visualise submitted FASTA sequences and browse/download/filter NCBI sequences. Does the messy work for you!
We’ve created a web interface to our GLUE project for #rabies virus!
Browse and download sequences, alignments and metadata: https://t.co/hW0ZVPoPKA
Includes a genotyping tool that can utilise any genomic region.
#Rabies #GLUEtools #OpenScience #EndRabiesNow
A preprint of our article on #gluetools and #hcvGlue is now available
GLUE: A flexible software system for virus sequence data https://t.co/n378OhXUUs
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