#bigscape - Twitter Hashtag

almost 2 years ago

Our article on #terpene #biosynthetic genes in #lichen #genomes is out now! We mined ~100 genomes, identifying & clustering these genes, & found 2 widely distributed terpene clusters #SqualeneSynthases #antiSMASH #BiGSCAPE #Metabolites #phylogenomics https://t.co/0wPlLhmXFT

GarimaSingh_GS's tweet photo. Our article on #terpene #biosynthetic genes in #lichen #genomes is out now! We mined ~100 genomes, identifying & clustering these genes, & found 2 widely distributed terpene clusters #SqualeneSynthases #antiSMASH #BiGSCAPE #Metabolites #phylogenomics
https://t.co/0wPlLhmXFT https://t.co/O703Veq45P

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Tyler @tyler_alsup_

almost 3 years ago

Need some help from my genome mining friends. Trying to use BiG-SCAPE and Corason for one of my projects, but I am currently struggling with running them. If anyone has experience and is willing to chat, please reach out! #genomemining #bigscape #corason

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Jorge Navarro @jorge_navarro_m

almost 3 years ago

Anyone could point us to GCF data? We're looking for: 🥇GCFs where BGCs are validated producers of a SM 🥈GCFs w/at least 1 validated BGC; related BGCs come from known producers 🥉Manual GCF groupings (no direct #BIGSCAPE output) please RT! 2/2

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Jorge Navarro @jorge_navarro_m

over 3 years ago

New mini release of #BiGSCAPE! The biggest change is the addition of MIBiG's 3.1. Let us know if you run into any problem in the official repository: https://t.co/cMqE6UbU81

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Y. Katsu @ykguitar1002000

about 4 years ago

#BiGSCAPE も #GoogleColab で動くことを証明できたので、備忘録として残します。 https://t.co/ptYK7wuHQH BiG-SCAPEの引用元 https://t.co/ZmjJbtasQG

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V@§v¡ वासवी @VasviChaudhry

about 4 years ago

#antiSMASH #bigSCAPE #greattools lot of applications in genome informed natural products discovery. Good to learn the in and out and #SOP from the developers @kaiblin @marnixmedema of these amazing tools #naturalproducts @tilmweber @novonordiskfond

VasviChaudhry's tweet photo. #antiSMASH #bigSCAPE #greattools lot of applications in genome informed natural products discovery. Good to learn the in and out and #SOP from the developers @kaiblin @marnixmedema of these amazing tools #naturalproducts @tilmweber @novonordiskfond https://t.co/XNRzxzqFvJ

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BERTRAND Samuel @SamBertrand44

over 5 years ago

Today it is #BiGSCAPE. Very interesting to compare fungal #NaturalProducts gene clusters !

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Christophe Duplais 🧪🪲🌾⌬ @chemistophe.bsky.socia @Chemistophe

about 6 years ago

Thanks to #anvio @antiSMASH_dev #CORASON #BiGSCAPE #NaPDOS developers! @merenbey @marnixmedema @kaiblin @NadineZiemert and many others

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Justin van der Hooft @jjjvanderhooft

about 7 years ago

@marnixmedema: recent sequencing studies provide such huge numbers of gene clusters that it would take 12 years with traditional #computational analysis assuming 15 minutes per gene cluster....hence the development of #MiBIG and #BiGSCAPE!

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