Top Tweets for #complexheatmap
It's an adaptation/extension from https://t.co/v7INN1iq5n https://t.co/E70BGS7xWo which is in Spanish π²π½ @lcgunam
Packages π¦ highlighted: #SummarizedExperiment #iSEE #smokingMouse #biocthis #recount3 #ExploreModelMatrix #limma #variancePartition #ComplexHeatmap #spatialLIBD
PyComplexHeatmap: A Python package to visualize multimodal genomics data @iMetaScience
https://t.co/iufsEWnQmD
#Bioinformatics #Python #ComplexHeatmap #Heatmap #visualization #DataScience
@wileymicrobio @wileyinresearch @WileyBiomedical
Looking to create a Complex Heatmap using Python? Look no further than PyComplexHeatmap, a handy tool available at:https://t.co/iniOY8vQ7s. Now you don't have to switch between Python and R for machine learning or single-cell data analysis projects.
PyComplexHeatmap: A Python package to visualize multimodal genomics data
https://t.co/OXTFXWpCZi
#Bioinformatics #Python #ComplexHeatmap #Heatmap #visualization #DataScience
@wileymicrobio @wileyinresearch @WileyBiomedical
Dr. Zuguang Gu @jokergoo_gu from @DKFZ @NCT_HD gave an online talk on Complex Heatmap Visualization, more details: https://t.co/jhndjDLnjP and https://t.co/T8Rm8dCv9o
#ChinaGut #heatmap #visualization #ComplexHeatmap #circlize #Rstudio #Bioinformatics #metagenomics
We linked data-driven spatial domains, and cell type population back to established anatomy of the tissue with spatial registration π with tools from #spatialLIBD #Rstats @Bioconductor and built some extra complex #ComplexHeatmap π«Ά @jokergoo_gu
The current features of #ComplexHeatmap.
New paper from @iMetaScience journal, This work reflects Dr. Gu @jokergoo_gu superb contributions to the field of computational biology / medical analysis.
#meded #bioinfomatics #DataAnalytics #omics
https://t.co/NzHL8e33Kv
#Complexheatmap visualization #rstudio #Bioconductor https://t.co/pcbObUztCP
@iMetaScience @jokergoo_gu @wileymicrobio
Seems like #ComplexHeatmap by @jokergoo_gu is getting lots of love at #BoG22 though I'm not π―% sure
It'd be great if people used "pkg::function()" footnotes on slides ;)
#RStats @Bioconductor
https://t.co/aYy78LxmlP
https://t.co/jOkxPxsU1c
In #ComplexHeatmap, a HeatmapAnnotation object can be thought as a virtual data frame, thus, you can subset annotations, like `anno[, c(name1, name2)]`.
This feature might be helpful when developing Shiny apps where users can select a subset of annotations for heatmaps.
![jokergoo_gu's tweet photo. In #ComplexHeatmap, a HeatmapAnnotation object can be thought as a virtual data frame, thus, you can subset annotations, like `anno[, c(name1, name2)]`.
This feature might be helpful when developing Shiny apps where users can select a subset of annotations for heatmaps. https://t.co/0g5gj4GxwI](https://pbs.twimg.com/media/FN1w1j4XoBE9EDE.jpg)
The next exciting new feature of #ComplexHeatmap: bivariate color maps ππ.
The plots below demonstrate two modes of integrating red and blue color palettes into 2D.
I feel I need to learn more about color science.
Add a new argument `beside` in `anno_barplot()` as well as in related functions. E.g. in oncoPrint. #ComplexHeatmap
Shared an exciting heatmap with my collaborators but it turned out the result was wrong because the order of matrix columns and the annotations were not the same. This error is difficult to catch. Now in #ComplexHeatmap, it checks row/col names of all matrices and annotations.
Working on interactive #ComplexHeatmap π. Now it includes annotations for the sub-heatmap and keeps the decoration on heatmap cells.
Legends are automatically adjusted according to the device size when resizing the device. Long-standing problem solved! Thanks to grDevices::recordGraphics() function! just discovered today. #ComplexHeatmap
I am incredibly impressed with #ComplexHeatmap by @jokergoo. It works efficiently with my matrix of 45 x 57106 cells which would have taken forever in other packages. It took less than 30 seconds to generate this.
https://t.co/EGuNyjwbiE
#ComplexHeatmap with π© shape as my PI @DrLegidoQuigley requested!
It only took me βΎ hours figuring out how to create itβπ©π»βπ»β³π
#WomenInDataScience #rstats #R #phdvoice #MassSpec #lipidomics #FavoriteFigure #womenintechπ€π
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