Hugues ROEST CROLLIUS

Genome evolution and function

[ATLASea has migrated to BlueSky @PEPR_ATLASea]

Discover #ATLASea, a #France2030 research programme to build an atlas of marine genomes. First step, sampling marines species #DIVEsea, then sequencing their genomes #SEQsea and managing all the data #BYTEsea.

EN : https://t.co/ZbVtO66r09
FR : https://t.co/0jhCow2Mp1

[ATLASea has migrated to BlueSky @PEPR_ATLASea]

#JobOpportunity ATLASea #Hiring
3 open positions are part of the BYTE-Sea project, which will develop @PEPR_ATLASea IT infrastructure and the tools for processing and analyzing the data made available to the international community
👉https://t.co/Bh0Xr087zq
Deadline: 25 October

[Hugues ROEST CROLLIUS @huguesrc]

Happy to have participated to the first meeting of the Catalan BioGenome Project @CatBiogenoma in a beautiful setting, presenting @PEPR_ATLASea, all part of @erga_biodiv. Looking forward to many more interactions with a great community!

[Catalan Initiative for the Earth Biogenome Project @CatBiogenoma]

Moltes gràcies a tots i totes pel vostre temps i aportacions, sense vosaltres el @CatBiogenoma no seria possible🦎🧬🌿

Fotografia de grup dels assistents al I Congrés del #Biogenoma.

[ATLASea has migrated to BlueSky @PEPR_ATLASea]

@PEPR_ATLASea #sampling_expedition_Leucate (Mediterranean Sea) organised by @Le_Museum: first organisms coming out from the sea, sorting, taxonomic identification and freezing before shipping to @seqlab @CEA_officiel for #genome_sequencing

[ATLASea has migrated to BlueSky @PEPR_ATLASea]

ATLASea mission: Sequencing the genomes of 4,500 species listed in the French EEZs, based on criteria designed to understand and analyse particularly threatened, fragile, biologically important and economically strategic species while accounting for phylogenetic coverage.

[ATLASea has migrated to BlueSky @PEPR_ATLASea]

Next week, ATLASea researchers will participate in a 2-week sampling expedition in the Mediterranean, organized in collaboration with @Le_Museum national d'Histoire naturelle. We are thrilled to sample the first species to be sequenced at @CEA_Jacob_. More info soon!

[ATLASea has migrated to BlueSky @PEPR_ATLASea]

We are pleased to share the link to the https://t.co/iKdh2haX1U brand-new website! The ATLASea programme will sequence the #genomes of 4,500 species along the French coastline, and analyse this trove of genomic data to better understand its #biodiversity.

[ATLASea has migrated to BlueSky @PEPR_ATLASea]

ATLASea Days - Our first meeting on the Data Management Plan took place on 1-2 June at @IBENS_ENS and gathered over 40 participants of @PEPR_ATLASea. Standard procedures for samples and data management will ensure the smooth flow of information between partners and ATLASea DB.

[Camille Berthelot @camilleberthelot.bsky.social @CamLBerthelot]

Many thanks to all our collaborators in the #GenoFish team - @Houpss35, @huguesrc, @GeT_Genotoul, @JohnPostlethw8, @ingo_braasch, @jul_decoy, @marc_rr, @ChristopheKlopp, @DrewT1023, @TomaDesvignes and many others not on Twitter!

[Hugues ROEST CROLLIUS @huguesrc]

Happy for this article 🐟🐠🐡to be out https://t.co/55dIVeRrTR, great work from Elise Parey and many co-authors including @CamLBerthelot and @Houpss35. Elopomorpha and Osteoglossomorpha are a new clade called Eloposteoglossocephala (ouch)!

[Hugues ROEST CROLLIUS @huguesrc]

@PaulFlicek @jacksonlab Bravo Paul, congratulations!

[Hugues ROEST CROLLIUS @huguesrc]

Merci 🙏 à @AlexandraDelbot @franceculture 📻pour ce coup de projecteur sur nos récents résultats sur la reconstruction de génomes ancestraux 🧬dans le Journal des Sciences ce matin https://t.co/4riEPHhDch

[Hugues ROEST CROLLIUS @huguesrc]

Reconstruction of hundreds of reference ancestral genomes across the eukaryotic kingdom... all available in @Genomicus!
https://t.co/4QiPX4I7ll

[Hugues ROEST CROLLIUS @huguesrc]

Avec un lien qui fonctionne pour les personnes hors-CNRS/With a link that works better if you're outside CNRS: https://t.co/O74cpt57Dk

[Hugues ROEST CROLLIUS @huguesrc]

Le PEPR ATLASea recrute son Project Manager, date limite le 7 février. The ATLASea Project is recruiting its Project Manager (announcement in French), deadline is 7th February:
https://t.co/Y5ss3qnawO

[Hugues ROEST CROLLIUS @huguesrc]

Our study on the development of AGORA, a method to reconstruct ancestral genome and applied to hundreds of animal, plant and fungi genomes is out
https://t.co/yvl9ma6JtS

[Hugues ROEST CROLLIUS @huguesrc]

Ever wanted to edit those FASTA headers without parsing the whole FASTA file? Or extract exactly THIS subsequence from THAT sequence among 1000s others? Then FUSTA is for you!
FUSTA: Leveraging FUSE for Manipulation of multiFASTA Files at Scale https://t.co/gK1vrTgLhn

[Ann Mc Cartney @CartneyAnn]

What a fun session to be a part of with representatives from Slovenia, Greece, Ireland, Belgium, France, Italy, Germany, Faroe Islands and Israel. @Constantinatheo, @TerezaManousaki, @huguesrc, @BuzanElena , @rmwaterhouse, @mazzonijc, @Alice_Mout, @ChipmanLab #BG22