Jaime Simbaqueba

Plant Scientist of #fusariumwilt #fusarium_oxysporum Interested in Plant-Pathogen Interactions, Fungal Genomics, Disease Resistance

[Sophien Kamoun @KamounLab]

Pan-genome bridges wheat structural variations with habitat and breeding

«  We investigated the copy number changes of NLR genes across genomes from different periods (1950–1960s, 1980-1990s and post-2000s) » https://t.co/qjBUpNA02S

[Plant Pathology @BSPPjournals]

😃Droplet digital PCR assay for the detection of Fusarium oxysporum f. sp. cubense tropical race 4 from different biological samples! https://t.co/9jnDceizPB

[Isabel Saur @IzzySaur]

First major paper accepted from the saur lab: https://t.co/2Z2x26SYqN We demonstrate atypical AVR effector function: inhibition of the barley MLA13 NLR by the AVRa13-V2 variant. Thx to the editor and reviewers for their suggestions.
With @MerleBS4 & @Emma_Crean_

[Joyce Van Eck @joy_van500]

Join us for our next virtual workshop on July 27th.

[bioRxiv @biorxivpreprint]

New variants in the Chloroplast Genome Sequence of two Colombian individuals of the Cedar timber species (Cedrela odorata L.), using long read Oxford Nanopore Technology https://t.co/Xo4RkGQgm8 #bioRxiv

[Remco Stam @EvoMPMI]

Interested in applying for a MSCA fellowship on plant-pathogen evolution or quantitative disease resistance? Let me know! And if we find a matching topic, @kieluni offers proposal writing support.

https://t.co/4kSf42JFRF

[Jaime Simbaqueba @jsimba99]

Dear bioinformatics community,
I'm looking for a reliable strategy to generate hybrid assemblies combining @PacBio and @illumina reads in filamentous fungi
I appreciate your comments!!

[Remco Stam @EvoMPMI]

Looking for a meaningful and exciting MSc programme?

Consider our international Agrigenomics course!
With modules on applied and computational genomics in crops and/or livestock, field excursions lab practicals and much more.

https://t.co/eKjk55m0nx
Application opens in March.

[Joshua Mylne @j_mylne]

A belated notice Jordi Muria Gonzalez will join the lab early 2023 to work on in planta fungicide metabolism. A chemist hailing from Mexico, Jordi did his PhD at ANU with @petersolomon99 on fungal metabolites then @theCCDM helped dissect the molecular basis of barley diseases.

[Jaime Simbaqueba @jsimba99]

@xocolatl_vrr @psuPPEM Congratulations!!!! well deserved now give me job I know PCR

[Juan Palacio @jdpalacio]

Flowering time, beautiful and important time to survive!
A Pleiotropic Flowering Time QTL Exhibits Gene-by-Environment Interaction for Fitness in a Perennial Grass https://t.co/9zWVdIyUlS

[João Araújo @joaofungo]

Dear Mycologist (or not) folks,
Any suggestion for the most effective DNA extraction method for field-collected specimen (not cultured), for sequencing using @nanopore?
Please RT.

[Jaime Simbaqueba @jsimba99]

https://t.co/xbSzA2uHG6 - Origins of the Black Death identified https://t.co/7z8pio6XMj

[Jaime Simbaqueba @jsimba99]

Conserved secreted effectors contribute to endophytic growth and multi-host plant compatibility in a vascular wilt fungus https://t.co/Fd1sRUVnNM

[Amey Redkar @RedkarAmey]

Check out our new review on 'Determinants of endophytic and pathogenic lifestyle in root colonizing fungi', in Current Opinion in Plant Biology @sciencedirect 🌱🍄 #root #fungi #effectors
https://t.co/0iIMNQBGaD

[Itai Yanai @ItaiYanai]

We should be funding scientists, not projects: grants to individual scientists should be the norm. Also, ideally we would fund scientists only based on their previous work (the best predictor of more good work - not a research proposal) and just trust them to do good science.

[Jana Sperschneider @JSperschneider]

Great review led by @MeganOutram91 on recent major advances in structural biology. Summarizes growing evidence for effector structural conservation and how this can be exploited for engineering plant immunity @Figueroa_MM @williams_simonj https://t.co/cD5Bll1ODB

[Jaime Simbaqueba @jsimba99]

is it valid to say that my job is looking for a job?, part time or full time....

[Ensembl @ensembl]

1/ Do you need to download sequences from #Ensembl? We’ve put together a #tweetorial to guide you in the right direction whether you need the sequence for a single exon or a whole #genome… 🧵

#genomics #bioinformatics #Ensembltraining 🧬

[Amey Redkar @RedkarAmey]

Delighted to be on the Cover of @NewPhyt 😊🤩. Our image that shows F. oxysporum invading Marchantia through an airpore @dipietrolab @SolanoRsolano . Read full story here https://t.co/OTh2em4FOM