Keith

software engineer @arcadiascience, runner, cyclist, conifer aficionado.

[Keith @kchev]

Pytorch meets baby worms! It was a pleasure to work with @dave_matus and everyone at @ArcadiaScience to help bring this across the finish line (and on a tight deadline)!

[Dave Matus @dave_matus]

Want to level up your automated phenotyping with DL/ML? At @ArcadiaScience, we’ve built a classifier to categorize developmental stages of #Celegans from high-throughput bright-field time-course images #WormClassifier 🧵1/12

https://t.co/CFOFcEjzv4

[Brae M Bigge @BiggeBrae]

Interested in computationally exploring how proteins are related across species? Join us @ArcadiaScience and engage collaboratively to design, create, and iterate on workflows and tools for comparing proteins in diverse organisms. Check out the job ad ➡️https://t.co/gXoNhfxIn6

[Jordão Bragantini @jobragantini]

Just launched v0.2.0 of our cell tracking tool 🚀 Check out our GitHub repo: https://t.co/6ngaD9j5L9! Seamlessly combines segmentation & tracking via Python API 🐍 Scales effortlessly to handle massive datasets, like the #zebrahub paper. #CellTracking #Bioinformatics

[Keith @kchev]

@liilii_tweet and the metaclass is the thing that makes the mold 🤓

[Keith @kchev]

@marcoyannic a better way to spin this same number imo is that it means your lifetime risk of dying in a car accident is ~1%

[Keith @kchev]

@_ahmetcansolak @github @GitHubCommunity @GitHubHelp I get the issue but there might be too little horizontal space when the browser window is around 1000px wide (which it often is). What about a shortcut to momentarily switch to preview mode? (something like shift+enter to 'evaluate' the markdown)

[Keith @kchev]

@marcoyannic @DanielSerwas Just saw the greatest helical pitch I think I’ve ever seen - looks closer to horizontal than vertical (this was a whitebark)

[Keith @kchev]

@marcoyannic @DanielSerwas Old-growth sugar pine in Calaveras State Park

[Keith @kchev]

@marcoyannic @kwinkunks if there's a style violation there I would say it's the use of the variable name `df` which commits the dual sins of being too generic and confusing naming with typing🙈

[Keith @kchev]

@marcoyannic @kwinkunks well, what is the alternative?

[Keith @kchev]

@loicaroyer this is a very misleading tweet. monkeypox *DNA* has been detected in wastewater in SF but there's no evidence that monkeypox can spread via wastewater (nor even that live virus can be detected in wastewater, afaik). and it already *is* endemic, just not in western countries

[Loïc A. Royer 💻🔬⚗️ @loicaroyer]

📢 Very excited to see our work #cytoself now published in @naturemethods . #cytoself is a deep learning method for fully self-supervised protein localization profiling and clustering. Led by @liilii_tweet with @kchev @LeonettiManuel at @czbiohub

https://t.co/QdnAGnqywY

1/n

[Manuel Leonetti @LeonettiManuel]

Check out our latest paper on self-supervised ML!!! w/ @loicaroyer @liilii_tweet @kchev, built upon OpenCell data. Loic’s tweetorial has all the info 👇

[Keith @kchev]

@marcoyannic might be a glitch w the backend? in my xp, searching by gene name does not always yield the top hit you expect...

[Keith @kchev]

@marcoyannic @ViralCarmichael I would bet I can sense the difference between 45F and 65F with a resolution of ~2F

[Keith @kchev]

@marcoyannic 🤔🤔🤔

[Keith @kchev]

@neuroConnG @figshare is great for this!

[Keith @kchev]

@marcoyannic @EricPhDing @scienceshitpost Along with EFD’s Twitter account in its entirety 😶

[Keith @kchev]

@marcoyannic Walther Flemming’s gorgeous drawings of mitotic chromosomes (these are from the 1880s but feel uncannily modern)

[Keith @kchev]

This should be required reading for new grad students (not to mention their PIs)

[Brad Stulberg @BStulberg]

If you go for broke you often end up broken. If you swing for home runs you often end up striking out. But if you just put the ball in play—over and over again—good things tend to happen.

On how to be consistent in work, sport, creativity, and really, all of life: