Kozo Nishida | 西田孝三

NRNB(National Resource for Network Biology) GSoC Alumni,
Bioconductor Community Advisory Board,
Software Carpentry Japanese Team,
PyData Osaka Organizer

[LM Studio Developers @lmstudiodevs]

We made @lmstudio's MLX Engine a lot faster in the latest release.

Read the technical deep dive from @ostensiblyneil.

P.S. it's all open source!

[Google for Developers @googledevs]

The new @GoogleColab bridges the gap between local environments and the cloud, providing a zero-friction execution platform for developers and AI agents alike. The CLI Supports:

⚡️ Agent-driven Colab workflows
⚡️ Instant GPU/TPU provisioning
⚡️ Remote script execution
⚡️ Interactive runtime access (console/REPL)

Learn more in the blog: https://t.co/n8TOYStlrp

[Kozo Nishida | 西田孝三 @kozo2]

成田着

[Kozo Nishida | 西田孝三 @kozo2]

@kristea_liu おいしかった！

[Kozo Nishida | 西田孝三 @kozo2]

MTS 992 で airport へ。来てよかったサンディエゴ。

[Kozo Nishida | 西田孝三 @kozo2]

ポヨ・ランチェロ

[Kozo Nishida | 西田孝三 @kozo2]

さすがに朝イチは並んでない。downtown San diego 店

[Kozo Nishida | 西田孝三 @kozo2]

朝めしのを食らってみる

[Kozo Nishida | 西田孝三 @kozo2]

https://t.co/tsErpLs6LK

[Kozo Nishida | 西田孝三 @kozo2]

@kristea_liu I didn't get any of them. I was looking for the canvas tote, but it was out of stock.

[Kozo Nishida | 西田孝三 @kozo2]

TRADER JOE'S につれてってもらったが、例の布トートは売り切れとった

[Kozo Nishida | 西田孝三 @kozo2]

ラ・ホヤの海

[Kozo Nishida | 西田孝三 @kozo2]

ラ・ホヤでも混んでた

[Marinka Zitnik @marinkazitnik]

How do you verify the outputs of AI agents?

Can we do better than asking a model to "be more careful."

https://t.co/7sQjaxFxYo

By connecting it to the underlying evidence and forcing independent verification.

In a new ToolUniverse @ScientistTools blog post, @GaoShanghua shows how to turn Claude Code from a system that answers from memory into one that grounds claims in real scientific data.

For example:

❌ "What's the gnomAD frequency of BRCA1 R1699Q?"

A model can confidently guess.

✅ With ToolUniverse, Claude Code retrieves the value from the actual source and cites it.

And when a claim really matters, you can force verification:

/tooluniverse:cross-validate: checks a claim against 3+ independent sources and reports whether they agree

/tooluniverse:research: investigates a question across multiple databases, models, and literature sources

/tooluniverse:literature-sweep: builds a curated evidence review rather than returning a search dump

As AI agents move into science, the challenge is no longer only generating answers, it is establishing if and why those answers should be trusted

@ScientistTools @GaoShanghua @harvardmed @KempnerInst @HarvardDBMI @broadinstitute

[APBioNet.org @APBioNetorg]

🚨 DEADLINE EXTENDED TO 22 JUNE 2026!
🚨Submit your research for #InCoB2026 in Penang, Malaysia!
We’ve added two new full-paper tracks:\
🧬 Bioinformatics Advances
💻 Advances in Computer Science Applications & Research
Join us 14–16 Sept! 👇

[Kozo Nishida | 西田孝三 @kozo2]

お世話になりまくった海外の研究者がちょいバーンアウト気味にセミリタイアされたことを知り、俺はこのままお世話になっただけで終わるのか、迷惑でなければ彼の後続の一助になれないか、と思う

[Kozo Nishida | 西田孝三 @kozo2]

ラ・ホヤの海辺

[Kozo Nishida | 西田孝三 @kozo2]

ラ・ホヤの海辺のアザラシたち

[Kozo Nishida | 西田孝三 @kozo2]

ラ・ホヤ店なら混んでないかな？と思って行ったところラ・ホヤ店も混んでた。

[Kozo Nishida | 西田孝三 @kozo2]

混んでたけどもやっとこ食うた

[Kozo Nishida | 西田孝三 @kozo2]

ラ・ホヤの海辺の卵温め