Leonard Koolman

Researcher @WeAreTUDublin with focus on #molecularbiology. Exploring the fascinating field of #microbiology.

[Int. Centre for Antimicrobial Resistance Solutions @ICARS_global]

🚨 Call open!

ICARS partner @CCAMP_India & UK Govt’s #GAMRIF launch the 2025 Programme for #AMR in the Environment 🌍

💰 Up to INR 2 Cr / £170K + global ecosystem support

🔬 Solutions for AMR in soil, water & air

📅 Deadline: Sept 26, 2025

🔗 https://t.co/ZiN6f2uSYM

#IAIH #IndiaFightsAMR @Taslimarif @PrinSciAdvGoI @PrinSciAdvOff

[Nature Microbiology @NatureMicrobiol]

Out Now! Cell wall stress in bacteria increases a nucleotide second messenger to reduce turgor https://t.co/NGdi1HnJs3 #Bacteria #CyclicDiAMP #CellWall

[Meixia Zhao @MeixiaZhao]

We’ll be hosting the Bioinformatics Summer Workshop from August 11–15. The workshop is completely free and held 100% online. If you are interested, please go ahead and register: https://t.co/rRUEtXLLQZ

[Nature Microbiology @NatureMicrobiol]

Out Now! Human gut bacteria bioaccumulate per- and polyfluoroalkyl substances https://t.co/3NgMfYqzOy #Microbiology #PFAS #ForeverChemicals

[Oxford Nanopore @nanopore]

In this masterclass, discover how to analyse your Oxford Nanopore sequencing data, from setting up your sequencing run, basecalling, and performing quality control - to performing in-depth analysis with EPI2ME, with no prior bioinformatics experience necessary. https://t.co/nq5YIcWDSR

[Steven Ge @StevenXGe]

Create plots like this in 2 minutes using DataMap, a small shinylive app that securely runs in your browser.
App: https://t.co/YsjKGdEe6V
Code: https://t.co/muOEZ031qm
Preprint: https://t.co/KXzA5e4TeX

[Steven Ge @StevenXGe]

Excited to launch DataMap – a portable, browser-based tool for generating heatmaps and PCA & tSNE plots.
No installs. No servers. Your data never leaves your device.
✔️ Interactive heatmaps, PCA, and t-SNE
✔️ Transform & normalize data on the fly
✔️ Upload CSV, TSV, Excel + annotations
✔️ Generate R code for reproducibility
Ideal for visualizing high-dimensional data matrices, such as RNA-Seq data. It's a Shiny app deployed via shinylive and WebAssembly. Also available as an R package.
Try it now: https://t.co/5CcKBkItlt
Source code: https://t.co/5CcKBkItlt
Preprint: https://t.co/5LZ4bi4oTr

[The Foundation to Prevent Antibiotic Resistance @ResResistance]

Research Grant 2025!

We're calling on researchers worldwide:

💡Innovative approaches to preventing the spread of antibiotic resistance are welcome!

🗓️ Deadline: April 30 2025
👉🏾 Apply for funding now
https://t.co/ipJyFe7XiU

[Oliver Schwengers 🇩🇪🇪🇺🇺🇦 @oschwengers1]

Interested in bacterial genomes?

Hundreds of thousands, even millions?

All annotated, taxonomically classified, integrated with metadata.

Easily searchable, viewable, downloadable, in sync with #AllTheBacteria.

Then BakRep is for you!
Poster P-CM-102

@VAAM_Microbes #VAAM2025

[Leonard Koolman @LeonardKoolman]

We're looking for motivated researchers to join our team in TU Dublin and apply for a MSCA-PF (Marie Sklodowska-Curie Actions Postdoctoral Fellowship).

Apply here: All details can be found by scanning the QR

Learn more about our project on EURAXESS: https://t.co/7qsUFDYY4L

[Dr. Asif’s Mol. Biology @asifmolbio]

Do you know?
Graphs 📊 for gene 🧬 ontology and KEGG pathways (like given below) are now super easy to draw, without any learning of complex codes. Through web-based environment and for free 🆓
Tutorial: https://t.co/uhuocjq6y1
#Bioinformatics #kegg #trancriptomics

[Dr. Asif’s Mol. Biology @asifmolbio]

A free web-based tool, super helpful for creating a wide range of colorful illustrations.
Link 🔗 https://t.co/yF8EEHquIU

[Dr. Asif’s Mol. Biology @asifmolbio]

Exciting news! I’m launching the official website for Dr. Asif’s Molecular Biology—a hub for molecular biology tutorials, bioinformatics tips, and research insights. Stay tuned for the big reveal!

[Wellcome Connecting Science Learning and Training @eventsWCS]

Free #bioinformatics toolkit for #biologists! Master #Linux, basic scripting, and advanced Nextflow pipelines, with #OnlineCourses that guide you through bioinformatics workflows. Gain deeper insights from your research🚀

📎 https://t.co/yNxvabKZj5
#BioinformaticsForBeginners

[Antimicrobial Resistance Fighter Coalition @AMResistance]

Antimicrobial resistance (AMR) puts the future of medicine at risk. Without effective antibiotics, surgeries & cancer treatments could fail.

We must act now to protect these life-saving medicines for future generations. Get started with this kit today: https://t.co/sZLVXInuTf

[Stephen Turner 🦋 @stephenturner.us @strnr]

A genomics learning framework for undergraduates https://t.co/mFJzrbeqru 🧬🖥️🧪

[Ryan Wick @rrwick]

New year, new assemblies!
I'm excited to announce Autocycler, my new tool for consensus assembly of long-read bacterial genomes!
It's the successor to Trycycler, designed to be faster and less reliant on user intervention.
Check it out: https://t.co/NksiyESF7u
(1/5)

[Dr. Asif’s Mol. Biology @asifmolbio]

An introduction to a web-based tool for free Bioinformatics plots | Chi Plot

[EMBL Events @EMBLEvents]

Are you looking forward to 2025 as much as we are? 👀

We just updated our 2025 EMBL Annual Poster to include even more courses and conferences for you to join, so go and have a look!

➡️ https://t.co/QMAxOlmGbR

#EMBLEvents #molecularbiology #lifesciencetraining

[TU Dublin / OT Baile Átha Cliath @WeAreTUDublin]

The Governing Body of TU Dublin has today announced the appointment of Dr. Deirdre Lillis as its next President.

https://t.co/gH3pDtOnrl