Olivier Commowick

Researcher in quantitative MR imaging (diffusion, relaxometry), registration and segmentation @empenn_lab @Inria_Rennes
@[email protected]

[Olivier Commowick @ocommowi]

Not used to that fancy logo yet ? 😅 Here is time for a refresh. Anima 4.2 and anima scripts 3.3 have just been released 🥳 Main new features include EM based tissue segmentation, TRK format handling, and more

Check out all download links and info on https://t.co/92Gw2eDui2

[Olivier Commowick @ocommowi]

Hi all, following Musk’s recent behavior with Twitter, I have tried and created a mastodon profile. We’ll see if I go there often but all news appearing here will also end up on mastodon. My login there is @[email protected]
Feel free to follow me there

[Olivier Commowick @ocommowi]

@ECaruyer Looks like there were even 18 sessions, great :)

[Olivier Commowick @ocommowi]

Hi diffusion MRI folks !

Would anyone know about available multishell datasets acquired repeatedly with the same parameters (more than just test retest, like many times) ?

Thanks !

[Olivier Commowick @ocommowi]

The first papers of our special issue on "Automatic methods for multiple sclerosis new lesions detection and segmentation" @FrontNeurosci, following the 2021 @MICCAI_Society MSSEG-2 challenge, are now out.

Feel free to check them out:
https://t.co/BGWkc6pnGv

[Olivier Commowick @ocommowi]

@olivecoulon @MELBAJournal @eLife @ApertureOHBM It’s more out of curiosity but methodology papers on brain quantitative image analysis are part of it. Aperture looks nice, will look into it

[Olivier Commowick @ocommowi]

More and more main journals follow the gold open access model with crazy prices. It becomes hard to select a journal that doesn’t. Does anyone know some reliable open access journals with reasonable fees ?
@MELBAJournal sounds great but focused on ML. Any other more general ?

[Claire Cury @[email protected] @CuryClaire]

Hello ! Nous cherchons un ingénieur pour travailler durant 12 mois sur un projet de recherche exploratoire autour de l'EEG, IRMf, eye-tracking et conductance cutanée, le tout dans la super équipe @empenn_lab!
https://t.co/K7nBtug4nH
@irisa_lab @Inria #JobAlert
RTs appreciated :)

[IRISA @irisa_lab]

Chaque mardi à 17H30, venez rencontrer un neuroscientifique dans l’expo « Incroyable Cerveau » à l'@Espace_sciences 🧠
🗓️Parmi toutes ces rencontres, ne manquez pas celles du 14 & 21 : Equipe de recherche @empenn_lab @Inria_Rennes @UnivRennes1 @Inserm @CNRS_dr17

[Olivier Commowick @ocommowi]

Open access PDF link: https://t.co/YOoQJLK4iL

[Olivier Commowick @ocommowi]

New paper from a former student of mine (A. Legouhy) ! 🥳 On online atlasing i.e. adding new images to an atlas as they come. Paper available at https://t.co/gSZBNFtj62 (and soon - a few days - freely on HAL)

[Olivier Commowick @ocommowi]

Ca y est, ANR enfin soumise !🤞Même si c'est intéressant, c'est tellement chronophage. Ce serait tellement plus simple pour tout le monde si on finançait les labos directement...

[Olivier Commowick @ocommowi]

@CuryClaire @Sciences_Avenir @SemCerveau35 Je confirme, le type sur l'illustration en a le cerveau tout retourné 😆

[Olivier Commowick @ocommowi]

Pour la semaine du cerveau à Rennes @SemCerveau35, venez tester vos connaissances sur la recherche autour du cerveau avec le quiz organisé par @empenn_lab @Inria_Rennes @irisa_lab !
Du fun, des questions, réponses et discussions
Inscriptions ➡️ https://t.co/fgi3jqnxYV

[Olivier Commowick @ocommowi]

@quinlabharvard Very good question. For now, something like what is done for an arxiv preprint I guess 🙂 Including the release number you are referring to and the repo address

[Olivier Commowick @ocommowi]

I am starting a new concept: an evolutive article on block-matching based registration. It details some core parts I have developed, but never published because they were too incremental.

The first release is here: https://t.co/wC8L9aiTLh

[Olivier Commowick @ocommowi]

Warning: This is not a peer-reviewed article ! But it could become so if motivated people want to leave reviews in the discussions: https://t.co/V7HWs8phPd

[Olivier Commowick @ocommowi]

The main idea is to provide:
- releases when sufficient new stuff is here, and that could be cited in other papers
- a discussion forum where people can give their feedback on anything: the idea of an evolutive article hosted on a git platform, suggestions, or even a review

[Francesca Galassi @fran_galassi]

Offre d'emploi Inria : Post-Doctoral Research Visit F/M DEEP LEARNING METHODS FOR SEGMENTATION OF MULTIPLE SCLEROSIS SPINAL CORD AND CORTICAL LESIONS IN MRI
https://t.co/ZqHFfqWFFm #Jobs.inria.fr #Emploi #Rennes

[Olivier Commowick @ocommowi]

Anima 4.1.1 is out 🥳 This release includes bug fixes, updates on registration, Legendre polynomials tool and some more MS preprocessing scripts.

Check it out on https://t.co/92Gw2eDui2