Raphaël Perez

Researcher at CIRAD in ecophysiology & plant modeling
#FSPM @Cirad @AgapInstitut

[Rémi Vezy @VezyRemi]

🌴New Internship: Calibration, Evaluation & Application of a 3D Oil Palm Growth Model! 🌴 Passionate about plant science and sustainable agriculture? Join our team in Montpellier to advance a 3D model of oil palm using data from fields in Indonesia, Nigeria and Benin. #modelling

[JXB @jxbotany.bsky.social @JXBot]

RESEARCH HIGHLIGHT: Combining modeling and experimental approaches for developing rice–oil palm agroforestry systems 🌾🌴🧪📊🌳 by Raphaël Perez et al

https://t.co/NQwLcblRr5

[Rémi Vezy @VezyRemi]

The candidate will mainly work on:
- PlantSimEngine.jl: A simulation engine for models related to plants https://t.co/i3qvCom9ml
- MultiScaleTreeGraph.jl: Read, write, compute MTG files https://t.co/C0zGzPv66s
- PlantMeteo.jl https://t.co/ramy39lwaW

[Rémi Vezy @VezyRemi]

🚨Exciting opportunity🚨! Looking for a 6-month intern (master-level) in #Montpellier. You’ll work on our 3D plant growth model of oil palm 🌴. You’ll also create a calibration pipeline for the model using a large dataset. DM for more info! #internships

[Rémi Vezy @VezyRemi]

🎉 Aaannd... the chamber is ready and steady, with the closing and sealing done neatly. 🎉 More tests ahead, then we put a plant inside! But for now, we're heading home to take some rest. (video is x2) @raphaelpaperez @mduthoit1

[Rémi Vezy @VezyRemi]

Finally building the second prototype of our automatic flux chamber, this time in Indonesia. These are the very first tests with a young palm to see how much time is needed for getting a CO2/H2O signal. @raphaelpaperez @mduthoit1

[Raphaël Perez @raphaelpaperez]

@Ahmad_PBG @JochemEvers @Cirad @AgapInstitut @UB_Official @Myriam27147618 @VezyRemi @Romain_BioImage @granier94732986 @UMR_LEPSE @UmrAmap @Ghanem_DeG No sorry, this is a PhD position only

[Raphaël Perez @raphaelpaperez]

**PhD position**: Towards selecting cereals for agroforestry: an ecophysiological approach to rainfed rice responses to light and water availability. Based at @Cirad @AgapInstitut Montpellier with field work in Indonesia @UB_Official.

Full description: https://t.co/xawSZTcNkq

[Rémi Vezy @VezyRemi]

Back to Indonesia with @raphaelpaperez, its incredible how fast these plants grow!

[New Phytologist @NewPhyt]

The effect of the vertical gradients of photosynthetic parameters on the CO2 assimilation and transpiration of a Panamanian tropical forest
Lamour et al. @testgroup_bnl @NGEETropics

📖https://t.co/Hdg7UpcvXe

[Rémi Vezy @VezyRemi]

The new forum for plant modellers is up ! Here's the link if you're interested : https://t.co/vkYqx1DIu5

The aim is to have a place of discussion with the community. Please share !

And special thanks to Michele Butturini for setting this up.

[Dr. Romain Fernandez @Romain_BioImage]

Tweeprint time!

Just published in @PlantMethods, RootSystemTracker, an automatic processing pipeline for high-throughput 2D+t reconstruction of root system architecture.

More in this #tweeprint thread! (1/13)

https://t.co/n7fXPAyW4d

[Dr. Romain Fernandez @Romain_BioImage]

Tweeprint time!

Phenotrack3D, an automatic processing pipeline for high-throughput 3D+t reconstruction of #maize architecture! Just published in @PlantMethods by Benoît Daviet @UMR_LEPSE and @BioImage_Ro @AgapInstitut #PhenomenTeam

More in this #tweeprint thread! (1/9)

[Francis M. Martin @fmartin1954]

Botanists are disappearing – just when the world needs them most https://t.co/hZBObVoVNp

[Raphaël Perez @raphaelpaperez]

Combining modelling and experimental approaches to assess the feasibility of developing rice-oil palm agroforestry system https://t.co/S9z3zZF62g

[in silico Plants @insilicoplants]

Using models to optimize planting density

#OilPalm #FSPM

Research: https://t.co/dgbhv1fsE6
Story: https://t.co/xD9awti5Yp via @botanyone

[Raphaël Perez @raphaelpaperez]

@VezyRemi @YouTube yes mais il y a la revue généraliste Peer community journal, ou bien des journaux d'agronomie qui acceptent les papiers PCI

[Raphaël Perez @raphaelpaperez]

Peer Community Journal https://t.co/tAgvw5tWzv via @YouTube

[Dr. Romain Fernandez @Romain_BioImage]

Time for my first #Bioimage #Tweeprint!

In time-lapse/multimodal imaging, objects move/deform. Images series must be aligned accurately to enable analysis. Hard in 2D, terrific in 3D!

This thread covers Fijiyama, a popular #Fiji plugin for image registration in 3D+t🧵
(1/8)

[in silico Plants @insilicoplants]

Using models to optimize planting density

#FSPM @INRAE_France @AgapInstitut @Cirad @SMART_Sinarmas @UmrAmap @biowooeb

https://t.co/uBXgQiEhWI