Reka Toth

Computational biologist, interested in epigenetics and cancer @LIH_Luxembourg, @DKFZ alumni

[Reka Toth @rn_toth]

@LIH_Luxembourg

[Reka Toth @rn_toth]

Looking to elevate cutting-edge, translational cancer research with AI? 🧬💻
We’re hiring a Data Scientist in AI at the Luxembourg Institute of Health! Join our fantastic department and make a real impact in biomedicine. Apply or share! 📩
https://t.co/4PFPqnhXMj

[Reka Toth @rn_toth]

🚨We have an opening for Data Scientists or Bioinformaticians using machine learning and AI with all kinds of molecular data to support cancer research. 🧬
Permanent position, fantastic team, exciting projects—what more could you ask for?
https://t.co/l7KB4kT3Am

[Anna Golebiewska @AnGolebiewska]

Can immunotherapy ever work in #glioblastoma?

In a new #NatureCancer review, we share our perspective on current limitations and future directions:
https://t.co/QqH2KubW7k

#NORLUX, @LIH_Luxembourg , @FnrLux #TELEVIE, @Glioresolve

[Anna Golebiewska @AnGolebiewska]

Happy to share a new #NORLUX study on humanized patient-derived xenografts of glioblastoma for investigating immunosupression and clinically-relevant immunotherapy testing. See for more: https://t.co/PUxIsz9rlN
@LIH_Luxembourg, @FnrLux, #immunotherapy, #preclinicalmodeling

[Reka Toth @rn_toth]

Each protocol has unique technical challenges, but we identified pipelines that consistently showed strong performance (see the paper for the winners!).
Our study establishes a comprehensive framework for more transparent and reproducible methylation analyses.

[Reka Toth @rn_toth]

Thrilled to announce our new paper, "Pipeline Olympics," is finally out in @NAR_OpenAccess!
This was a massive effort, co-led with @pavlo_lutsik . We present a gold-standard benchmark for DNA methylation sequencing workflows.
Check it out: https://t.co/tcn80ZKzW0

[Reka Toth @rn_toth]

With so many computational workflows for DNA methylome sequencing, it's hard to know which to trust. We used an "experimental gold standard" dataset to systematically benchmark entire pipelines, from raw reads generated by 5 different whole-genome protocols to methylation calls.

[Reka Toth @rn_toth]

🚨New preprint from the #NORLUX team @LIH_Luxembourg! Check it out 👇

[Anna Golebiewska @AnGolebiewska]

Precision medicine in high-grade gliomas? We used high-throughput drug screen in #NORLUX patient-derived organoids multi-omics and machine learning to assess pharmacogenomics: https://t.co/7KCVyoocSU...
#precisionmedicine, #organoids, #drugscreen, #pharmacogenomics, #braintumors

[Reka Toth @rn_toth]

@Fischuu @samstudio8 We had a lot of fun, for sure. The result is more than 70 monsters ☺️ Thanks again for the detailed description!

[Reka Toth @rn_toth]

If you are in Luxembourg, visit us at the Researchers' Days! You can be a researcher for one day, isolate DNA and sequence your own monster 👻 Come and have some fun! @rockhal_lu @LIH_Luxembourg @FnrLux

[Reka Toth @rn_toth]

The Lego sequencer idea comes from @samstudio8 and @Fischuu Thank you both for the inspiration! Check out their their GitHub pages for the description:
https://t.co/S4wV7y5U6M
https://t.co/zVh2tEx4d1

[Reka Toth @rn_toth]

@nanopore With @SabrinaFritah @KEiden_15 and others!

[Stephen Turner 🦋 @stephenturner.us @strnr]

Comprehensive multi-omics profiling of a healthy human cohort https://t.co/ioJY4S3Una
#Nextflow workflow: https://t.co/lqxy63UckR

[Valentina Boeva @val_boeva]

Are you wrapping up your PhD in the coming month, or are you currently a postdoc? Looking to dive deeper into cutting-edge research in cancer genomics, AI, and computational biology? Our lab (https://t.co/hvBIk3IlYd) is seeking passionate, ambitious researchers to join us through the SNSF Swiss Postdoctoral Fellowship program! 🧬✨

This fellowship offers a unique chance to collaborate in a dynamic lab focused on leveraging multi-omics and AI methods to advance our understanding of cancer biology.

🔹 Who Should Apply: Candidates with a strong background in computational biology and computer science, and who are enthusiastic about interdisciplinary research and innovation.

🔹 Why Join Us: Our lab provides a stimulating environment, support for growth, and the resources to develop your research expertise.

Find more information about the application requirements and deadlines here: https://t.co/9v8oMT1391

To contact our lab and indicate your interest, please, fill out this form before October 20: https://t.co/eHHC0cshE2
We will contact you for an interview if your application satisfies the requirements.

[Reka Toth @rn_toth]

Thank you @ManelEsteller for highlighting our manuscript. It was a huge effort of many and we are grateful to all co-authors for their expertise. We are happy to finally have this story out as a pre-print!

[Manel Esteller @ManelEsteller]

Contributing to tour de force led by Reka Toth @rn_toth @rn_toth and Pavlo Lutsik @pavlo_lutsik from
@LIH_Luxembourg @KU_Leuven @DKFZ comparing #computational workflows for processing DNA #methylation sequencing data. Called "Pipeline Olympics" is available at @biorxivpreprint
https://t.co/NG0Xsk3YO3

[Reka Toth @rn_toth]

We are looking for a new team member! 🤩
Are you a bioinformatician/data scientist with experience in NGS data, data spaces, data-sharing solutions, and databases? If yes, please apply! We are recruiting for a permanent position @LIH_Luxembourg
https://t.co/FodoFMgF2h

[Anna Golebiewska @AnGolebiewska]

#NORLUX @LIH_Luxembourg is recruiting. If you have expertise in #metabolomics and interest in cancer research check out our job advert for a postdoc position:
https://t.co/ZJpEP6OrdW

[Reka Toth @rn_toth]

@SoftSarcoma Congratulations, Ana!