Samuel Abalde

JSPS postdoctoral fellow at the Atmosphere and Ocean Research Institute, U. of Tokyo. Interested in phylogenomics, transcriptomics and comparative genomics.

[Samuel Abalde @saabalde]

It seems it's already typset. That was quick.
https://t.co/p4Zv8Mgroe

[Samuel Abalde @saabalde]

New manuscript out, led by @yannbuck, about Xenacoelomorpha's Hox repertoire. This was fun :-)
https://t.co/p4Zv8Mgroe

[Samuel Abalde @saabalde]

New manuscript out, led by @yannbuck, about Xenacoelomorpha's Hox repertoire. This was fun :-)
https://t.co/p4Zv8Mgroe

[Samuel Abalde @saabalde]

@paularodflo Lo echan por YouTube! Algo es algo...

[Samuel Abalde @saabalde]

Friendly reminder: next Monday!

[@SEGenetica @segenetica]

🧬 Simposio MUSEUM BIODIVERSITY GENOMICS
🗓️15/Sept
📍@mncn_csic
Ponentes internacionales, genómica aplicada a colecciones naturales y nuevas fronteras en biodiversidad.

🗓 Inscripciones hasta el 1/9
👉 https://t.co/f5PaDscRRN

#Genomics #Biodiversity #CSIC #Museums #Science

[Centro de Neurociencias Cajal - CSIC @CNCajal_CSIC]

1/ 🧠 La neurocientífica 𝗟𝗶𝘀𝗲𝘁 𝗠𝗲𝗻é𝗻𝗱𝗲𝘇 𝗱𝗲 𝗹𝗮 𝗣𝗿𝗶𝗱𝗮 (@LMPrida) ha sido nombrada directora del nuevo 𝗖𝗲𝗻𝘁𝗿𝗼 𝗱𝗲 𝗡𝗲𝘂𝗿𝗼𝗰𝗶𝗲𝗻𝗰𝗶𝗮𝘀 𝗖𝗮𝗷𝗮𝗹 (𝗖𝗡𝗖) del @CSIC

Su misión: lanzar un programa de investigación ambicioso y multidisciplinar.

[Max Planck Society @maxplanckpress]

The #MaxPlanckPostdocProgram offers a guaranteed contract of at least 3 years, targeted mentoring, and career workshops. The call for applications is open now! 🚀 Take advantage of this opportunity and browse the job vacancies. https://t.co/yWjsq8ld8A

[@SEGenetica @segenetica]

🧬 Simposio MUSEUM BIODIVERSITY GENOMICS
🗓️15/Sept
📍@mncn_csic
Ponentes internacionales, genómica aplicada a colecciones naturales y nuevas fronteras en biodiversidad.

🗓 Inscripciones hasta el 1/9
👉 https://t.co/f5PaDscRRN

#Genomics #Biodiversity #CSIC #Museums #Science

[Samuel Abalde @saabalde]

@JamesfvFleming @UniBarcelona @Jesus_LozanoF @JAMSTEC_PR @KyushuUniv_EN Good luck with that! I feel there is a lot of room (and interest) for such a collaboration, but it needs someone to spearhead it. It takes some time to get it moving

[Samuel Abalde @saabalde]

Later this month I will visit the Asamushi Research Center for Marine Biology, in Aomori, where I will train undergraduate and graduate students in the use of low-coverage genomic data for studying diversity.
I am very excited about this workshop! :-)

https://t.co/MRePCRkC9G

[Evolutionary Genomics @evol_genomics]

Genomics Sheds New Light on the Ancestral Bilaterian Opsin Repertoire and Suggests Rhabdomeric Phototransduction in Xenacoelomorpha
https://t.co/3i6CRlx88O @GenomeBiolEvol

[PCI Genomics @PCIgenomics]

📑 New PCI Genomics recommendation, by @saabalde
https://t.co/84ytYoD9yq

On the work of Ole K. Tørresen et al. (2025) Comparison of whole-genome assemblies of European river lamprey (Lampetra fluviatilis) and brook lamprey (Lampetra planeri) https://t.co/nlW6ZkIJp0

[Samuel Abalde @saabalde]

@Dendrodoris Congrats!

[Rob Waterhouse also @rmwaterhouse.bsky.social @rmwaterhouse]

Help us improve the @erga_biodiv Knowledge Hub! A quick questionnaire (1-2 minutes!) will guide us in adding content that better meets your #biodiversity #genomics needs. We really appreciate your feedback!
https://t.co/DoKwSZe7l2

[Samuel Abalde @saabalde]

Circatidal control of gene expression in the deep-sea hot vent shrimp Rimicaris leurokolos

https://t.co/Wg7b6UZBHB

[Samuel Abalde @saabalde]

Finally, the typeset version is out: https://t.co/Pbx3lHOdzJ

[Samuel Abalde @saabalde]

New paper with @ulfjo out today on Systematic Biology: "A Phylogenomic Backbone for Acoelomorpha Inferred from Transcriptomic Data".

https://t.co/9s3a8eNQEi

[David J Glass MD @davidjglassMD]

RNAseq is commonly performed. We compared N=30 wild-type Bl6 mice to an N=30 heterozygotic knockout with a phenotype, and then downsized. We found you need at least an N= 8-12 to avoid a >50% false positive rate. A 2nd line confirmed the finding.

https://t.co/wwKRUcdKmH

[Samuel Abalde @saabalde]

New paper with @ulfjo out today on Systematic Biology: "A Phylogenomic Backbone for Acoelomorpha Inferred from Transcriptomic Data".

https://t.co/9s3a8eNQEi

[Michael Hiller @hillermich]

Job Alert. We have 6-year funded positions for a postdoc and bioinformatician to join our @ERC_Research #BATPROTECT project. Topics include genome assembly, annotation, comparative genomics & transcriptomics and more. Pls RT. https://t.co/bfYjajDPmt

[Samuel Abalde @saabalde]

@theBentoLab Three weeks ago they published an (they say) improved version of this protocol: https://t.co/4AEO1z2oc2