ಸಮರ್ಥ (Samarth TS, PhD)

Bioinformatician

[ಮುನ್ನೋಟ ಟ್ರಸ್ಟ್ Munnota Trust @Munnota_Trust]

ಕನ್ನಡಿಗರು ಏಳಿ��ೆ ಹೊಂದಲು,ಕನ್ನಡದಲ್ಲಿ ವಿಜ್ಞಾನ ತಂತ್ರಜ್ಞಾನದ ಕಲಿಕೆ ಎಲ್ಲಾ ಹಂತಗಳಲ್ಲಿ ಸಾಧ್ಯವಾಗಬೇಕು. ಈ ನಿಟ್ಟಿನಲ್ಲಿ ಆಗಬೇಕಾದ ಮೂಲ ಕೆಲಸವೆಂದರೆ ವಿಜ್ಞಾನ ತಂತ್ರಜ್ಞಾನ ಪದಗಳ ಕಟ್ಟುವಿಕೆ. ಈ ಕೆಲಸ ಎಡೆಬಿಡದೇ ನಡೆಯಬೇಕಿದೆ.
ನಿಮಗೂ ಈ ಕೆಲಸದಲ್ಲಿ ಕೈಜೋಡಿಸುವ ಆಸಕ್ತಿ ಇದೆಯೇ? ಹಾಗಿದ್ದರೆ, ಇಲ್ಲಿದೆ ಒಂದು ಪದಗಳ ಪೈಪೋಟಿ.ಪಾಲ್ಗೊಳ್ಳಿ

[Krish Ashok @krishashok]

Fun fact: the map of lactose intolerance in India tracks with this migration into the Indian subcontinent and subsequent genetic intermixing and migration patterns within India

[Navin Kabra @NGKabra]

Who are Indians descended from? Aryans from Europe? Dravidians who've been "here" forever? The Indus valley civilization?

A controversial question for 150+ years, but now we have DNA evidence that answers these questions with a high degree of certainty.

🧵

[Samuel Hume @DrSamuelBHume]

The 10 biggest cancer papers of the last 10 years (in my opinion)

1. Blocking PD1 activates the immune response against cancer - especially if the cancer has more mutations

https://t.co/rBCVRcDfvo

[Lior Pachter @lpachter]

The choice of whether to use Seurat or Scanpy for single-cell RNA-seq analysis typically comes down to a preference of R vs. Python. But do they produce the same results? In https://t.co/rVOiR847CY w/ @Josephmrich et al. we take a close look. The results are 👀 1/🧵

[Chris Miller @chrisamiller]

Two other resources of note for IGV:

- Interactive guide to getting started with IGV:
https://t.co/qvjTdO1Jhy

- The supplement to this article, which is an incredibly comprehensive visual guide to reviewing somatic variants: https://t.co/YYXaD7ddLl

[AJHG @AJHGNews]

We're very excited to launch a series of exciting and thought-provoking articles that explore the future of human genetics and genomics. Read more in this launch piece from @girlscientist & @NHGRI_Director
https://t.co/J0EVliMHiG

[sina @sinabooeshaghi]

You're asked to process single-cell sequencing data, what should you do first?

Before downloading the data, it is *crucial* to understand the structure of the reads. Where are the barcodes? UMIs? Genomics features?

[Nancy Zhang @NancyZh60672287]

What gets erased when you integrate #singlecell data across samples/studies, and can you get it back? When samples are from e.g. healthy & disease, should you simply massage cells together? FINALLY, I feel we can answer this question: https://t.co/0PrkIZDyDp

[Support Our Science @SupportOurSci]

Canada’s federal graduate scholarships and postdoctoral fellowships are not competitive! 😞

For ex, the NSF postdoctoral fellowship is valued at $106,000 CAD 🇺🇸, compared to the $45,000 🇨🇦 offered by the Tri-Agency fellowships 😱🤕

#scholarships #graduate

[ಸಮರ್ಥ (Samarth TS, PhD) @SamarthArya]

@TheTaxHeroes @MattTingcom @TheTaxHeroes does taking a dividend to move to RRSP from the company save corporate taxes? Please explain.

[Rohini Singh @rohini_sgh]

No one does Modi the biggest disservice than the bhakt mandali. A teacher says vote for educated leaders without taking names and bhakt mandali starts to screech that it is an insult to Modi. An actor tweets an old Neil Armstrong joke about finding a Malayali chaiwala on the moon and Bhakt mandali thinks that’s an insult to Modi. Bhakts are bhasmasur basically.

[Alejandro Adem @alejandroadem]

Canada must address this important issue not only because it’s the right thing to do, but also to remain competitive as a global player in science and innovation. https://t.co/lzdIzF5DWA

[Yun S. Song @yun_s_song]

Predicting the effects of missense variants is a central problem in human genome interpretation. We are thrilled to share our preprint on using cross-protein transfer (CPT) learning to improve zero-shot prediction of disease variant effects:
https://t.co/Q4JLkLwNh8
(1/8)

[TheDoodlingScientist @deepsud13]

Any leads for a company that prints posters on fabric in Quebec/delivers to Quebec?

[Quirks & Quarks @CBCQuirks]

Because of low funding, many young scientists are now making less than minimum wage, which means they either have to live in poverty, quit practicing science, or leave Canada.

The Support our Science movement is calling for a change.

https://t.co/RHbXS52GnL

[GenSCAPE (aka Raghavan) Lab 🧬 @GenSCAPE_Lab]

✨ Excited to share our most recent work on population genetics in Southwest India! ✨

🗣️ We ask: What is the relationship between genetic & oral histories in this region? 🧬

https://t.co/TqiSy3lsPw

🧵 A thread with some highlights …

[TheDoodlingScientist @deepsud13]

Anyone looking for a roommate in Boston this fall semester? I highly recommend my talented sister @KTsudarshan studying in Berkeley Music Conservatory.

[Parashar Dhapola @ParasharDhapola]

✨Scarf✨ got published today🎉
https://t.co/H3F38sZLdr

1️⃣ Analyze millions of cells on your laptop
2️⃣ Topology preserving subsampling of cells
3️⃣ Cell projection for label prediction
4️⃣ Graph-based tSNE and hierarchical clustering

#Singlecell #Genomics

🧵 1/8

[Arjun Raj @arjunrajlab]

Over the years, the lab and I have come up with various materials for science process (writing, presenting, reviewing, etc.). Here they are, loosely organized in a Google Doc. Hope it is useful! https://t.co/dYtFtBUpgQ