Saad Khan

MD/PhD from Albert Einstein College of Medicine. Building AI agents for insurance claims handling at Evolution IQ.

[Libusha Kelly @microbegrrl]

Delighted to present "Genomic surveillance of SARS-CoV-2 in the Bronx enables clinical and epidemiological inference”, a collab between @EinsteinMed @MontefioreNYC, our lab, the awesome @ChandranLab crew, starring @MaxFels @ScienceSaad @RyanPhorster https://t.co/rNHlIwmFoW

[Patrick De Boever @deboevep]

Social distancing helps...#CoronaOutbreak #FlattenTheCurve #tousensemble

[Senator Patty Murray @PattyMurray]

By staying home if you're sick or have been in contact with someone who is, social distancing, & washing your hands, we all can help #FlattenTheCurve. This is critical to slow the spread of the coronavirus & give our hospitals and clinics time to respond. https://t.co/bWxhYPqWA2

[Libusha Kelly @microbegrrl]

Our department of biochemistry @EinsteinMed is hiring! TT Assistant Professor in the area of computational protein engineering and deign. Details: https://t.co/s9wZ0OV2hb

[Saad Khan @ScienceSaad]

@tvatanen @microbegrrl @LeahTGuthrie @EinsteinMed @eLife @LeviWaldron1 The update should go up in a few days once approved by BioRxiv

[Saad Khan @ScienceSaad]

@tvatanen @microbegrrl @LeahTGuthrie @EinsteinMed @eLife Also, the original CMD still references that paper (which is why I cited it), so if you want that updated, we should probably ask @LeviWaldron1 and crew.

[Saad Khan @ScienceSaad]

@tvatanen @microbegrrl @LeahTGuthrie @EinsteinMed @eLife Thanks for letting me know. I've updated the citation to reference 27306663 instead. I was able to find the metadata in supplementary figure 8 of the original paper (27133167), however. I think that they compile the metadata manually in CMD while pulling genetic data from NCBI

[Saad Khan @ScienceSaad]

@tvatanen @microbegrrl @LeahTGuthrie @EinsteinMed @eLife from estonia / russia / finland, the ages are for newborns, etc.).

[Saad Khan @ScienceSaad]

@tvatanen @microbegrrl @LeahTGuthrie @EinsteinMed @eLife For example, some of them have 'middle ear infection' as reason for amoxicillin administration. I think this is why those samples are annotated with things like bronchitis and otitis. The other aspects of the metadata look correct to me at a glance (they're all infants

[Jake Scott @CancerConnector]

Excited to have @w_k_chang visiting to tell us about his exciting work with @microbegrrl - Inferring the quasipotential landscape of microbial ecosystems with topological data analysis https://t.co/GAOZjVGnUv

[Saad Khan @ScienceSaad]

Excited to share our lab's recent work on detecting diseases from microbiome sequencing! This type of research could lead to non-invasive diagnostics for diseases like colorectal cancer and inflammatory bowel disease one day. See the preprint here: https://t.co/1l0e7MZt1H