SeqCode

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SeqCode: |
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Join the SeqCode Community: discussion:

[Evgenii Protasov @protasov_evgeni]

Alkaliphilic aceticlastic #methanogen isolated from mud volcano.

#seqcode #taxonomy #methane

https://t.co/AKALHDOuOK

[SeqCode @seq_code]

@m_chuvochina recently presented SeqCode to the @tdwg community and the story echoes a lot with the current discussion under the Botanical code...

[Dmitry Schigel @dschigel]

@CSIRO @tobiasguldfroe @GBIF @ENASequence @embl @Bicikl_H2020 @gbiffrance Next, @m_chuvochina brings us to the history and the world of handling prokaryotic 🦠 DNA 🧬 derived data with @ace_gtdb, esp. on names of uncultured prokaryotes, mentioning @seq_code

[Bergey's Intl. Society for Microbial Systematics @BISMiS_]

Prof. Whitman will be giving an update on the @seq_code at our next #BISMiSLive session this Saturday. Make sure you register at https://t.co/FXiSO2Idqt @Leibniz_DSMZ_en @BccmCollections @CCUG_Sweden @CABI_Microbe
@ICSP_news @ari_pune #TaxonomyIsFun

[SeqCode @seq_code]

📢 Request for public discussion and ballot to amend #SeqCode rules on the priority of #Candidatus names and correction of typographic and orthographic errors is now available:
https://t.co/zSHyxk66M3

Stay tuned to join the conversation!

@seq_code @ISME_microbes #nomenclature

[SeqCode @seq_code]

Prepare to be recognised for your scientific achievements! 🎖️

[SeqCode @seq_code]

📢Exciting News! 🏆Introducing the #SeqCode Prize - Celebrating Excellence in Prokaryotic Systematics!

https://t.co/tnOhVbAuPD

The SeqCode Prize recognises outstanding contributions in prokaryotic systematics and the promotion of the SeqCode. 🌐

🌟Categories include 👇

[SeqCode @seq_code]

1️⃣ Innovative software leveraging the SeqCode Registry capabilities.
2️⃣ Advancements in genomic data quality assessment. 3️⃣ Contributions to prokaryotic systematics using the SeqCode.
4️⃣ Educational materials and outreach related to SeqCode.

#SeqCode @ISME_microbes

[Maria Chuvochina @m_chuvochina]

Final version of the GTDB-defined higher taxa ms is live.
https://t.co/FJOFuIbrw6

@ace_gtdb @seq_code #ICNP #nomenclature

[Kamlesh Jangid @jangidk_]

If its our inability to grow the so-far uncultivated in the lab, do they not exist? Why differentiate between the ones we can and cannot grow in the lab? #TaxonomyIsFun listen to the debates @BISMiS_ Live YouTube channel @ICSP_news @seq_code

[SeqCode @seq_code]

Meet our elephant in the room!
We can't hide anymore...so we talk about it a lot :)

In this @ASMicrobiology blog, Barny and Brian are discussing why it is essential to link names to genome sequences and what #SeqCode is in short.

https://t.co/vdPTq0Fw1o

[SeqCode @seq_code]

Can we accelerate taxonomy?
Check this paper from @sigwartae

"...In many cases, it is clear that not all of these data are necessary to distinguish one species from another. This is interesting science, but not actually required for naming species..."

[Julia Sigwart @sigwartae]

Species are going extinct before we discover them

Have you ever wondered, why is there no service to support taxonomic species descriptions?

The @oceanspecies_ project @Senckenberg proposes a new model to accelerate taxonomy. Out now in #Bioessays

https://t.co/UV0NKmCUu9

[SeqCode @seq_code]

@MDzunkova 😊

[SeqCode @seq_code]

Miguel gave a great overview of the #SeqCode and its Registry at #FEMS2023 yesterday.

Still got some questions?

Don't hesitate to ask or drop your suggestions here:
https://t.co/EGHPo6gyXp

#seqcode #nomenclature @ISME_microbes

[Evgenii Protasov @protasov_evgeni]

@seq_code presented by Luis Rodriguez-R @_lrr_ . A way to name uncultured diversity and make genomes the type material. Important step to describe real diversity of microbes rather than only those that can be cultured (fyi, tiniest fraction so far).

[SeqCode @seq_code]

Are you planning to name a new #virus within your bacterial host or both?

Consider this new guidelines 👇

"The guidelines presented here focus on the MIUViG standards on genome quality and expand on the naming of sequences and their submission to public databases."

[SeqCode @seq_code]

📢Save the date!

[Fanus Venter @fanus_venter]

Looking forward to this opportunity to share our thoughts @SteenkampEmma @marike_palmer @Fabiteam1 @UPnasagric

[SeqCode @seq_code]

@taylorpriest2 😊

[SeqCode @seq_code]

@marike_palmer 🙏

[Fanus Venter @fanus_venter]

Melandre van Lill ready to use the #seqcode to describe her Mesorhizobium species @Fabiteam1 @UPnasagric @seq_code

[SeqCode @seq_code]

😍

[Fanus Venter @fanus_venter]

Promoting the #seqcode for the description of Mesorhizobium species @fanus_venter @SteenkampEmma @Fabiteam1 @UPnasagric @seq_code

[SeqCode @seq_code]

📢Dear #community, the #SeqCode Reconciliation Commission is seeking your contribution: please share your opinion on the validation of the species name #Omnitrophus_fodinae by commenting on this request:

https://t.co/FrNZuZCIPX

Deadline: 28 September 2023