usadellab

plants all the omics, carbon, walls and other fun stuff

[usadellab @usadellab]

This is the way BioRender has really odd licensing issues. Use Bioicons .... :-)

[Catalin Voiniciuc @cvoiniciuc]

Even with an institutional subscription, my lab will be returning to making original graphics or using open-source icons such as https://t.co/QQFI1qxTDL and https://t.co/zpZ3ocZas3 for future publications. Please share any other recommendations.

[marek mutwil 🇺🇦 @LabMutwil]

1/ How conserved are plant stress responses across 1 billion years of evolution? We built a cross-kingdom stress atlas spanning 36 species, from green algae to angiosperms, across 9 stresses. 13.6M DEG calls from 3,200+ manually curated experiments. 🧵https://t.co/2aZ46FjKYw

[Neue Zürcher Zeitung Deutschland @NZZde]

Der Straftatbestand der Politikerbeleidigung gehört abgeschafft. Paragraf 188 sollte Hass bekämpfen und Kommunalpolitiker schützen – wurde aber zum Instrument, mit dem Spitzenpolitiker die Meinungsfreiheit einschränken. Aus der Reihe «Der andere Blick»:

[Sophien Kamoun @KamounLab]

I just published: Leave the red shirt out: Scientists, stop complicating the story

Scientists are brilliant at finding details. We are less brilliant at knowing which details to shut up about.

https://t.co/LX2FbS4EUG

[Alga Zuccaro @Team_Zuccaro]

Really proud of this work led by Ruben Eichfeld! We show how a CBM domain gain/loss can rewire fungal chitinases, turning them from antifungal enzymes into immune-suppressing effectors that support plant symbiosis. https://t.co/WyuKbZN7EQ

[UNTWIST_H2020 @UNTWIST_H2020]

🌱 Discover camelina at the Paris Agricultural Show (21 Feb – 1 Mar)! @INRAE_Intl our partner will present @UNTWIST_H2020 research and a poster on #camelina as a summer crop, breeding for climate adaptation & consumer choice.
Try the interactive card game comparing oils!

[Alga Zuccaro @Team_Zuccaro]

We are pleased to announce that CEPLAS has open research positions for both doctoral and postdoctoral researchers. Please help in spreading the word:
https://t.co/b2bmEgPhum

[Satoshi Kawato 川戸 智 @KawatoSatoshi]

Visualizing pairwise genome comparisons? No need to run BLAST separately anymore! 🧬
​#gbdraw has implemented #LOSAT, a WASM-powered Rust reimplementation of BLASTN/TBLASTX.
​✅ No local installation
✅ No data transfer (Serverless)
​Try it here: https://t.co/ahqoRxbDHT

[usadellab @usadellab]

Finding genes in genomes without pre-training it works for animals (vertebrates and invertebrates)/plants/insects/fungi. It needs a GPU for best performance but works on Apple now as well. https://t.co/kx9otLScfl

[Nature Methods @naturemethods]

Helixer: a tool for ab initio gene annotation with broad taxonomic coverage.

https://t.co/5No2xwaR4R

[Ralf Reski 🇩🇪🇪🇺 @ReskiLab]

Assistant Professor - Botany
University of Northern British Columbia
#plantscijobs #plantscijob
https://t.co/gtEQ6UZQin

[Neil Renic @NC_Renic]

every academic you meet is fighting a battle you know nothing about. Make it worse by asking them how the writing is going

[Zhiqiang Sha (@zhiqiangsha.bsky.social) @sha_zhiqiang]

Bridging the dimensional gap from planar spatial transcriptomics to 3D cell atlases | Nature Methods
https://t.co/oW8lUm8DdN

[usadellab @usadellab]

Are you interested in @ceplas_1 single cell data and spatial transcriptomic data analysis and inference? Then apply for this graduate school HDS-LEE PhD Position in my group co-supervised by Prof Assent. https://t.co/X8UOLkB66P. For questions don't hesitate to contact me.

[Ralf Reski 🇩🇪🇪🇺 @ReskiLab]

ASSISTANT PROFESSOR IN NON-SEED PLANT DIVERSITY (BRYOPHYTES, FERNS, LYCOPHYTES).
Vancouver, Canada.
#plantscijobs #plantscijob
https://t.co/VAmqTPyY5p

[Alga Zuccaro @Team_Zuccaro]

Our new study shows that the root endophyte Serendipita indica complements host immunity across diverse Arabidopsis thaliana accessions. Even in lines lacking root TNL immune receptors such as ISI.
https://t.co/itgacgCT6z

[Armin Djamei @effectomics]

Plz retweet. W3 position Sustainable pest control open!

[Sophien Kamoun @KamounLab]

#Elsevil

[usadellab @usadellab]

@Hasindu2008 @nanopore @AMD @bonson_wong nice!

[usadellab @usadellab]

Tomorrow @LGaccione2974 from @balurens' lab will explain on our @nanopore day at HHU Düsseldorf, how to turn 9.41 data(!) into a high quality pangenome. If you can't make it read all about it here as well: https://t.co/yuFaL6KrJS

[usadellab @usadellab]

@hixingz @ProhensJaime @giulianolab1 @solgenetics Do you mean the germplasm? You can get them via SMTAs from the original custodians of the germplasm. All data is freely accesible.

[usadellab @usadellab]

1/8
How do graph pangenomes and panphenomes help breeding eggplant? https://t.co/WGRqnXmb7c. This feat would not have been possible without a large team of 24 researchers from 7 countries including @ProhensJaime @giulianolab1 @solgenetics and BarchiLab