Victor San Kho Lin

OMO -- Opinions are My Own!

[Collaborative Centre for Genomic Cancer Medicine @GenCancerCentre]

We're on the look-out for a Genomics Assistant/Specialist to assist our #UMCCR Precision Oncology group and the genomics core program manager. Apps close 30 Nov. For PD and how to apply visit UniMelb jobs page: https://t.co/TfFC8TQUJL

[Victor San Kho Lin @vskl]

Up for our curation team! :)

[The Advanced Genomics Collaboration (TAGC) @TAGCAustralia]

JOB: Our Clinical #Genomics Platform is seeking an enthusiastic Curation Scientist for a new role interpretating and reporting on genomic analysis generated by the Bioinformatics Platform team, with a focus on cancer—based at @UMCCR.

Learn more + apply: https://t.co/OwhVyoCFAU

[Victor San Kho Lin @vskl]

4/ Final thought: How to be brutally honest about a piece of code you've written? TDD techniques, test coverage are there, yes. But. Human can be unconsciously bias. Future is here with AI/ML backed bot on PR reviews; guide you code better! Will find time 2 try GH Copilot, soon.

[Victor San Kho Lin @vskl]

1/ yawsso v1.0.0rc1 is out! Mainly addressing code quality and technical debt measures; in regards to #CodeQL, LGTM, #CodeClimate with beefing up repo DevSecOps with #trufflehog, #ggshield scanners. ditto PR #67. Some notes from the activity in thread.

[Victor San Kho Lin @vskl]

3/ Find myself amuse addressing CodeClimate Cognitive Complexity. Yell couple times: "yah, my app is complex; wut do ya reckon!!" ;). Anyhow. Stay optimistic & fix all technical debts there. Result is positive! Btw, local pulled CC's rules db is ~6GB image ;(

[The Advanced Genomics Collaboration (TAGC) @TAGCAustralia]

The Advanced Genomics Collaboration (TAGC)—an initiative of @Illumina and @UniMelb, supported by @InvestVictoria—is a biomedical and economic powerhouse using #genomics to create world-leading projects and businesses that will improve health for everyone. https://t.co/lPmxKpkF4E

[Collaborative Centre for Genomic Cancer Medicine @GenCancerCentre]

#UMCCR is building a database of anyone who has been touched by cancer – patients, survivors, carers, or close family members or a friend of someone diagnosed with cancer. Interested to know how you can help our research teams? Visit https://t.co/2lpZdNEVxs

[Oliver Hofmann @fiamh]

Another exciting development in the UoM/Illumina partnership - having an Illumina Innovation lab across the floor from us: https://t.co/uOwhoGgUUR

[Collaborative Centre for Genomic Cancer Medicine @GenCancerCentre]

A/Prof @fiamh's Genomics Platform group is the engine room of precision oncology at #UMCCR. Since '17, they have created a reliable, scalable and fast bioinformatics platform reducing the time taken to analyse genetic sequencing data from 72 to 24 hours. https://t.co/KuPc6g0Ut7.

[a.k.a brainstorm @braincode]

Here's a #GSoC2021 @gsoc wrap-up for htsget-rs, a 100% @rustlang implementation of the @GA4GH protocol that makes bioinformatics formats accessible to the web:

https://t.co/xedzmKdUdO

Kudos to successful 2 students Marko and Daniel & @zaeleus @chris_zen @vskl for co-mentoring!

[Prof Zornitza Stark @ZornitzaS]

Our latest ⁦@AJHGNews⁩ sharing tools & knowledge improves gene & panel curation! Very proud of this #collaboration ⁦@EllieMcDonagh⁩ ⁦@PanelAppTeam⁩ ⁦@PanelAppAus⁩ ⁦@GenomicsEngland⁩ ⁦⁦@AusGenomics⁩ ⁦@GA4GH⁩ 🧬🌏 https://t.co/b6kqmx7D0I

[a.k.a brainstorm @braincode]

Are you a student interested in @rustlang, #bioinformatics and #AWS? Our htsget-rs idea is now up on this year's @gsoc under @GA4GH umbrella:

https://t.co/oEjWL34ttC

Ping me and @vskl for more info!

[Naw Thitsar Moe Myint @NawThitsar]

NO MORE SILENCE #HearTheVoiceOfMyanmar #SaveMyanmarDemocracy https://t.co/7MK3VAvYYc

[May Wong @MayWongST]

Now: #Myanmar #Yangon protesters continue to chant their opposition against #militarycoup, voicing unhappiness at #military government. #WhatishappeninginMyanmar

[Illumina @illumina]

Oliver Hofmann (@fiamh), head of the Genomics Platform Group is using the ICA platform to standardize elements of their analysis pipelines for purposes of collaboration and broader use within the #genomics community.

https://t.co/pGVLEcyKGH

[Oliver Hofmann @fiamh]

As part of a newly funded University of Melbourne Genomics Hub we are expanding our team with staff bioinformaticians, data managers and curators at all levels. Help us improve the rapid analysis of patient's cancer genomes and transcriptomes. Details at https://t.co/oSI9luutuw

[Collaborative Centre for Genomic Cancer Medicine @GenCancerCentre]

The @illumina-@unimelb
Genomics Hub will provide the systems to support state-wide rollout of affordable whole-genome sequencing for cancer and critical diseases, to transform healthcare and research. @seangrimmond @fiamh @UniMelbMDHS @InvestVictoria

https://t.co/TdqAfHWgnU

[Collaborative Centre for Genomic Cancer Medicine @GenCancerCentre]

A/Prof Oliver Hofmann (@fiamh) & team have established a reliable, scalable cloud-based #bioinformatics platform to analyse the genomic data of hundreds of #cancerpatients in parallel, drastically reducing analysis time from 72 to 12hrs >> https://t.co/QrCtJPLcwY