Andre Ribeiro's Lab

Professor @TampereUniMET: Studies #GeneNetworks #SingleCell & #Biophysics #Bacteria focusing on #AntibioticTolerance and #StressResponse

[Andre Ribeiro's Lab @AndreSR_Lab]

How do bacterial operons respond to genome-wide stress? In our new @ScienceAdvances paper, we show that it is all about internal promoters and premature terminations! A key mechanism, shared by many species. 📄+ 💻 + 🧪 = https://t.co/MfJWbWYryY.

[Andre Ribeiro's Lab @AndreSR_Lab]

New paper in @PLOSCompBiol! We found natural #Ecoli genes with #bimodal dynamics at the #singlecell level. We propose a model, study their robustness to stresses, and share lots of data for future works. These genes might have many applications. https://t.co/zsZb4l6hDt. 🥳

[Biochemistry @BiochemistryACS]

Promoter spacing:

Ribeiro and colleagues @TampereUniMET study the transcriptional interference of engineered promoters in nonoverlapping, tandem formations, finding attenuation depends on multiple factors.

https://t.co/UpKLEhBhmr

#syntheticbiology
#transcription

[Biochemistry @BiochemistryACS]

New issue! 📣

Learn about copper chaperones, target determination, IR for protein structure & more.

https://t.co/QCndWb2PRm

Cover art: Chauhan et al @TampereUniMET study engineered promoter spacing, finding attenuation depends on multiple factors.

https://t.co/UpKLEhBhmr

[Andre Ribeiro's Lab @AndreSR_Lab]

And now, for something completely new to the LBD, we have contributed with the cover for a number of @BiochemistryACS: https://t.co/U7SCox9Gcr. 🥳👩‍🎨🧑‍🎨🎨.

[Andre Ribeiro's Lab @AndreSR_Lab]

We are happy!🙂🕵️‍♀️! to share our new paper in @BiochemistryACS on transcription attenuation 🧬#ecoli in tandem promoters due to RNAP collisions and fall-offs: https://t.co/09mrzzBc1A. Genetic constructs will be available in #AddGene! #GeneExpression #TranscriptionFactor #Biorender

[Andre Ribeiro's Lab @AndreSR_Lab]

We are happy🙂to share our library of reporters of global regulators of gene expression 🧬#ecoli published in #mSystems and (soon available in #AddGene)! We hope it is useful 🔬 https://t.co/z7IkYq2sUe. https://t.co/JDaJts9Iey.
#Biorender #GeneExpression #TranscriptionFactor
📷

[Achillefs Kapanidis @AchillesKap]

Abstract deadline: July 30... waiting for your latest stories!

[Andre Ribeiro's Lab @AndreSR_Lab]

We are happy to inform that we completed and shared our work "A library of reporters of the global regulators of gene expression of Escherichia coli" https://t.co/CwAC75LhO8 . Hopefully, it will be useful to many. 🙂🧬🔬

[Jarno Mäkelä @MakelaJarno]

Only one more week to apply to @ERC_Research funded PhD and postdoc positions in our #TEMPADAPT project. More info:

https://t.co/kBFZmszbFX
https://t.co/EYB6ck2C4n
https://t.co/ImrZM7w7mY

[Andre Ribeiro's Lab @AndreSR_Lab]

We have just opened a position for a new Ph.D. student: https://t.co/RtJmZuEnMr. Please apply if you like our project! 🎓🔬🦠🧬🙂

[Andre Ribeiro's Lab @AndreSR_Lab]

!We are very grateful to @SigridJuselius for a 3-years grant! Thank you! We will study transcriptional programs that evolved in bacteria 🦠 to increase their antibiotics tolerance💊.😀

[Samuel Oliveira @samuel_matos_]

Happy to share that I’m starting a new position as Research Assistant Professor at #bostonuniversity!
Excited to begin building my research group at the @BU_ece focusing on engineering microfluidic chips to study synthetic microbial communities. #research #syntheticbiology

[Andre Ribeiro's Lab @AndreSR_Lab]

We have published a new video, presenting our recent work on the influence that the topology and logic of the transcription factor network of E. coli has on the global transcriptional programs responsive to shifts in media richness! 🔬🧬🦠(https://t.co/b32cjPNMVn).

[Andre Ribeiro's Lab @AndreSR_Lab]

Happy to announce the PhD defense🎓of my student M Bahrudeen. He studied genome wide🧬effects of local DNA features on #SingleCell🔬single gene expression in #Ecoli🦠. The defense will be transmitted online. #supercoil #TandemPromoter🥳
@TampereUniMET
https://t.co/txjUDmOEQZ

[Andre Ribeiro's Lab @AndreSR_Lab]

@TampereUni @TampereUniMET I am very thankful to Howy for his enormous, continuous support to science, teaching, and science communication in Finland and worldwide (including to our small group). I wish him the best in his new adventures.

[Andre Ribeiro's Lab @AndreSR_Lab]

We have published (in our laboratory's YouTube channel) a short video describing one of our recent works on the role of sigma factors in gene expression regulation! 📽️🤓(https://t.co/ppYowyczae)

[Jarno Mäkelä @MakelaJarno]

📢 JOB ALERT! 📢
We have @ERC_Research funded PhD and postdoc positions available to work on our #TEMPADAPT project. More info:
https://t.co/HyPaWXIaSh
https://t.co/huqnCSkW6n
Please RT.

[Jarno Mäkelä @MakelaJarno]

I am humbled and excited to share that my ERC Starting Grant project #TEMPADAPT has been funded! We will study how bacteria adapt to extreme temperatures from 0°C to 100°C using #SuperResolution #singlemolecule tracking @ERC_Research @BIOTECH_UH @HiLIFE_Helsinki @helsinkiuni

[Andre Ribeiro's Lab @AndreSR_Lab]

A small being 🦠that was a giant step in evolution! 17.9 is the #InternationalMicroorganismDay. To celebrate, we partnered with @SPMicrobiologia to host a virtual tour of our lab (10AM GMT+1). See how we study bacteria. 👨‍🔬 🔬🧬🧪 https://t.co/c9rYRZsXqp @IntMicroDay