@BioXSD|#GTrack is a family of "rich" XML, JSON, YAML, tabular, and binary data formats for integrative bioinformatics and genomics. Dev by @ELIXIRnorway & al.
.@sveinugu is going to present a related work on genomic colocalization now in the Eliot Chapel, and a beautiful poster at 3pm at G10. #GCCBOSC@galaxyproject#GTrack
Now with a DOI!
"BioXSD | BioJSON | BioYAML – towards unified formats for sequences, alignments, features, and annotations [version 1; not peer reviewed]. F1000Research, 7(ISCB Comm J):958. Poster. DOI: 10.7490/f1000research.1115728.1" https://t.co/8f9l1qghYT
Our poster is now online as "BioXSD | BioJSON | BioYAML – towards unified formats for sequences, alignments, features, and annotations" in @F1000research https://t.co/TKmHu1HGSE #GCCBOSC#ELIXIR18
@lopantano .@lopantano Want to move from a linear, isolated model to one where there are multiple paths to the same result (moving between file formats). Mir Gene DB adapted GFF3 to fit miRNA, put information in the last column. Developed Mirtop to work with this format #GCCBOSC
#GTrack is a generic super-format of GFF, BED, WIG, etc. for annotation of genomes and sequences, elements, and their relations. Heavily used in the Genomic Hyperbrowser, an extension of @galaxyproject. @ELIXIREurope@elixirnorway https://t.co/RL90Gxu025
The new @edamontology version now includes the whole @BioXSD|#GTrack ecosystem of generic integrative formats:+BioJSON+BioYAML+GSuite+BTrack https://t.co/6pTlNRATDf